XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCAGGGACTTATCATATAACTAGAGCCAAAAAAAATGTGACATGCATTTT
CCCCAAGCTAGAGTTTCTGCCATAGCACAGAAGTCAATCTCAATGAGATT
TAAAAGTTTATGCCCAAGGGAAGTGCATGCTATTAACTGGCAATGTATAC
AATTAAACTTAAAGCATGGTCACAGTGTTTTAATCAGGAAAGCTAAGAGT
CGTTTCTGTCCTAGGGGGTAATAAATGAAGGCAAAAGCAATTGAACATGC
TTTCTGATGTGCTAAGTGATATATGGGCTCTCTTGAGTCACCAAATTGGA
AGGGCCACATGCTTAGTTAATCAACACTGCACAGTCATATTAGGGGAGAG
GTGATAAATTTAACAGATGTTATTCTGGCAAGAGTCGGGGTAAAATGGAC
TTGATCCACCACCTCAGTAATTAAACTGCTGTCTTCAAATACCTATTATC
ATATGCTCAACTATAAAAGAGAATGAATTTTTGATTTTCAGTTCTTCACT
GGGTAGATTTAGAAATACTATCATCACAATGGTTTTAGCTGGTCTCTGAC
AAATATGCGTTGACTAGGATAGAAGTCGTAGTTAGGGTAGATAATCAGAT
CCACGGAGACCAGTTAATGCACCTCTTCTCAAAATTTTCAGAACCGAATG
GAACAAAATCACATTCATAGGAAACCATTAAGACTGCACTCTGGTGATAA
ATTGCTGTTC

CCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAATGTCCTGGAATTCCAACGAAGA
ATTCTTTGTCTATATTCTTCAGGGTGATTAGTCTATATCTACCTATTTTT
TGTTTTTATTTATTTATTTATTTGGTATTTTCTTCATTTATATTTCTAAT
GCCATCCCGAAAGTCCCCCATACCCTTTGTTGTAGTGACAGAGTAATAGT
GACCTTCTTGGGTGGGTTTGAAAGACAACCTTTCTCTCAGTTTTATTTTA
GTCAGTTGGGAAGGTTGATATAGTCCTTTGTTTTAAATACATTTCATAAT
ATTTGTCAACAAAGTGTTTTAGCCTTTACCCTTTCTTTGATGGGAATGTA
TATATATACATATACATTACGAAATTCCATTTCTTTATGATTCAACTTTC
TTAAGGATTATACATCTAGAGATCTATTGTTTTTAGATTATCAAACTTTT
TGGTATATAACCATTCTTAGCATTAAAAAAAATTTTTATGTGTGTGAGTA
CATTTGTATGTGTGAGAGTAGATATATTTGGGTGTCTGTGTGTGCATGTT
GTGGAGGCCTGGGATTGAAGTTGGCAATGATCCTTGATTAAATTTTCACT
GTATTCATGGAGTCAGGGTCTCGTAATCAAATGTCATGAAATGTATAGTC
CTGTTAACCAGCTTGTTACTATGATAACTTGTCCCTGCCTTTTGAGGTTG
CTACTACAGATG

Query= MSMg01no307_n07.b1 MSMg01no307_n07.b1 CHROMAT_FILE:
MSMg01no307_n07.b1 PHD_FILE: MSMg01no307_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:59 2005
         (392 letters)



>mm_chr12_69447696_69448487
          Length = 792

 Score =  704 bits (364), Expect = 0.0
 Identities = 385/392 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttaatcaacactgcacagtcatattaggggagaggtgataaatttaacagatgttattct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaatcaacactgcacagtcatattaggggagaggtgataaatttaacagatgttattct 260

                                                                       
Query: 61  ggcaagagtcggggtaaaatggacttgatccaccacctcagtaattaaactgctgtcttc 120
           |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcaggggtcggggtaaaatggacttgatccaccacctcagtaattaaactgctgtcttc 320

                                                                       
Query: 121 aaatacctattatcatatgctcaactataaaagagaatgaatttttgattttcagttctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatacctattatcatatgctcaactataaaagagaatgaatttttgattttcagttctt 380

                                                                       
Query: 181 cactgggtagatttagaaatactatcatcacaatggttttagctggtctctgacaaatat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactgggtagatttagaaatactatcatcacaatggttttagctggtctctgacaaatat 440

                                                                       
Query: 241 gcgttgactaggatagaagtcgtagttagggtagataatcagatccacggagaccagtta 300
           | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 gtgttgactaggatagaagtcgtagttagggtagataatcagatccacagagaccagtta 500

                                                                       
Query: 301 atgcacctcttctcaaaattttcagaaccgaatggaacaaaatcacattcataggaaacc 360
           ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 501 atgcacctcttctcagaattttcagaaccgattggaacaaaatcacattcataggaaacc 560

                                           
Query: 361 attaagactgcactctggtgataaattgctgt 392
           |||||||| |||||||||||||||||||||||
Sbjct: 561 attaagaccgcactctggtgataaattgctgt 592


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space:   299889
Effective search space used:   299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no307_n07.g1 MSMg01no307_n07.g1 CHROMAT_FILE:
MSMg01no307_n07.g1 PHD_FILE: MSMg01no307_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:59 2005
         (291 letters)



>mm_chr12_69474811_69475501
          Length = 691

 Score =  522 bits (270), Expect = e-153
 Identities = 285/290 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatgtcctggaattccaacgaagaattctttgtctatattcttcagggtgattagtctat 60
           |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 640 aatgtcctggaattccaatgaagaattctttgtctatattcttcagggcgattagtctat 581

                                                                       
Query: 61  atctacctattttttgtttttatttatttatttatttggtattttcttcatttatatttc 120
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 atctacctgttttttgtttttatttatttatttatttggtattttcttcatttatatttc 521

                                                                       
Query: 121 taatgccatcccgaaagtcccccataccctttgttgtagtgacagagtaatagtgacctt 180
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 taatgccatcccaaaagtcccccataccctttgttgtagtgacagagtaatagtgacctt 461

                                                                       
Query: 181 cttgggtgggtttgaaagacaacctttctctcagttttattttagtcagttgggaaggtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 cttgggtgggtttgaaagacaacctttctctcagttttattttagtcagttgggaaggtt 401

                                                             
Query: 241 gatatagtcctttgttttaaatacatttcataatatttgtcaacaaagtg 290
           |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 400 gatatagtcctttgttttaaatacatttcataatatttgtcagcaaagtg 351


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space:   192324
Effective search space used:   192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)