Query= MSMg01no308_c17.b1 MSMg01no308_c17.b1 CHROMAT_FILE:
MSMg01no308_c17.b1 PHD_FILE: MSMg01no308_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:25 2005
(247 letters)
>mm_chr12_41925907_41926554
Length = 648
Score = 443 bits (229), Expect = e-129
Identities = 242/247 (97%), Gaps = 1/247 (0%)
Strand = Plus / Minus
Query: 1 gctgaagncttagacagcaaagagnaatatgaattggtccctggtcttaagcactcacag 60
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 447 gctgaagtcttagacagcaaagagtaatatgaattggtccctggtcttaagcactcacag 388
Query: 61 ccatgaaaactgactcaatataatgtgacacatgctagaaaagaattgtgtctagttctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ccatgaaaactgactcaatataatgtgacacatgctagaaaagaattgtgtctagttctg 328
Query: 121 ggtagaaaggaagcaattaattttgtttagaagcagagcaactgctatcgagaaaagat- 179
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gctagaaaggaagcaattaattttgtttagaagcagagcaactgctatcgagaaaagatg 268
Query: 180 ttatattaaacctttgtaatggcatctaaatacgaggactaacactcatatacaaaacag 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atatattaaacctttgtaatggcatctaaatacgaggactaacactcatatacaaaacag 208
Query: 240 acttcat 246
|||||||
Sbjct: 207 acttcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 648
Length adjustment: 9
Effective length of query: 238
Effective length of database: 639
Effective search space: 152082
Effective search space used: 152082
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no308_c17.g1 MSMg01no308_c17.g1 CHROMAT_FILE:
MSMg01no308_c17.g1 PHD_FILE: MSMg01no308_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:25 2005
(320 letters)
>mm_chr12_41772490_41773209
Length = 720
Score = 609 bits (315), Expect = e-179
Identities = 318/319 (99%)
Strand = Plus / Plus
Query: 2 aatcctggtatcatttgatgttgatgagacaataaaaataagtttcttataaagtgggtg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aatcctggtatcatttgatgttgatgagacaataaaaataagtttcttataaagtgggtg 261
Query: 62 aagcgagagaattattcttagggctgtaagatgaaaataaccttttcatggctactgtga 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aagcgagagaattattcttagggctgtaagatgaaaataaccttttcatggctactgtga 321
Query: 122 aaataattaagttttgtttattattggtgctttttttggtaaatgaaattgtactttgtt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aaataattaagttttgtttattattggtgctttttttggtaaatgaaattgtactttgtt 381
Query: 182 actgaaaacaggaacatagtagaagctttgccaagtatgtaccttgctcccatggtatgt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 actgaaaacaggaacatagtagaagctttgccaagtatgtaccttgctcccatggtatgt 441
Query: 242 atagtcagacactttatgtgtcctgtaaagatctgaccaaaataatgtaacaatgtcatg 301
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 442 atagtcagacactttatgtgtcctgtaaagatctgaccaaaataatgtaacagtgtcatg 501
Query: 302 ttatattattgtgaatgta 320
|||||||||||||||||||
Sbjct: 502 ttatattattgtgaatgta 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
