Query= MSMg01no308_f22.b1 MSMg01no308_f22.b1 CHROMAT_FILE:
MSMg01no308_f22.b1 PHD_FILE: MSMg01no308_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:40 2005
(234 letters)
>mm_chr12_15610651_15611284
Length = 634
Score = 424 bits (219), Expect = e-123
Identities = 231/235 (98%), Gaps = 2/235 (0%)
Strand = Plus / Plus
Query: 1 gaactggcaatagtgactgcataaggagacaggcagatgtcattagcttgctctccctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaactggcaatagtgactgcataaggagacaggcagatgtcattagcttgctctccctgt 260
Query: 61 gcttatgagaggagagtctagatgatgccagacgtgactcttaatgatgaggcaggtgtt 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 gcttatgagaggagagtctagatgatgccagacgtgactcttaatgttgaggcaggtgtt 320
Query: 121 aggttaccatgggaagctggagt-aaagtagtaaagagatttgagtggagaaatacagga 179
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 321 aggttaccatgggaagctggagtgaaa-tagtaaagagatttgagtggagaaatacagga 379
Query: 180 agataaagccggatgcattctcaatggcccagctgatgaacgaagttggcaggtg 234
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aggtaaagccggatgcattctcaatggcccagctgatgaacgaagttggcaggtg 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no308_f22.g1 MSMg01no308_f22.g1 CHROMAT_FILE:
MSMg01no308_f22.g1 PHD_FILE: MSMg01no308_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:40 2005
(288 letters)
>mm_chr12_15820060_15820747
Length = 688
Score = 536 bits (277), Expect = e-157
Identities = 283/285 (99%)
Strand = Plus / Minus
Query: 1 cactgagctgtcattctcctatgaaatatgcaccatcatcggcagggagcccctccccct 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 485 cactgagctgtcattctcctatgaaatatgcaccatcatcggcagagagcccctccccct 426
Query: 61 ccttttgctcaccctcagtccagcactttaatatatttctcttccaaaggctggagatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ccttttgctcaccctcagtccagcactttaatatatttctcttccaaaggctggagatga 366
Query: 121 ttttacgtaagaactgtctgtggccaaattctgcaagagcatcttgctattctttctttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttttacgtaagaactgtctgtggccaaattctgcaagagcatcttgctattctttctttg 306
Query: 181 tttaaaactagggctatctctggtctctctgttcgttttcctttctgatccttcgagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tttaaaactagggctatctctggtctctctgttcgttttcctttctgatccttcgagaca 246
Query: 241 tatttcattctaggctgaccttacagtgtcatttgccgacttgct 285
||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 245 tatttcactctaggctgaccttacagtgtcatttgccgacttgct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
