Query= MSMg01no308_g20.b1 MSMg01no308_g20.b1 CHROMAT_FILE:
MSMg01no308_g20.b1 PHD_FILE: MSMg01no308_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:44 2005
(665 letters)
>mm_chr12_14935405_14936469
Length = 1065
Score = 1181 bits (611), Expect = 0.0
Identities = 648/662 (97%), Gaps = 6/662 (0%)
Strand = Plus / Minus
Query: 5 gaattcttggaatcccc--gctcagatcctcatctgcatggcaagccattttggtgccca 62
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 gaattcttggaa--cccatgctcagatcctcatctgcatggcaagccattttggtgccca 806
Query: 63 caatcaacagttttaacaaaattatttaacttttagtaaactcaccaatggactcataat 122
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 caatcaacagttttaaaaaaattatttaacttttagtaaactcaccaatggactcataat 746
Query: 123 gaattagcatgatagaatccaacatctgagagtcaacagtcttaattaatcagagaatag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gaattagcatgatagaatccaacatctgagagtcaacagtcttaattaatcagagaatag 686
Query: 183 caaggccgatatgatgagactcttatcatctcagagagtatgctaccatctatagaactg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 caaggccgatatgatgagactcttatcatctcagagagtatgctaccatctatagaactg 626
Query: 243 acataataattgcttcaaaactactgttagaatgcagtgaaaagcctagagctattattt 302
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 625 acataataattgcttcaaaactactgttagaatgcagtgaaaagcttagagctattattt 566
Query: 303 tcacattccacatgcttaaaatcttcaggcattattattccttattgcctcctgggaact 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcacattccacatgcttaaaatcttcaggcattattattccttattgcctcctgggaact 506
Query: 363 gcattgtataccaccgaaattcatgaaaatgaatataccttatgtaaaatacaattgaat 422
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcattgtata-taatgaaattcatgaaaatgaatataccttatgtaaaatacaattgaat 447
Query: 423 ttttttctaatgacttgtttagtacaatgtatgttcacattgaagggtttaactatatac 482
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 446 ttttttctaatgacttgtttagtacaatgtatgttcacattgaagagtttaactatatac 387
Query: 483 ttgctcttccttcatttttttaattccttgtctgttgtcagagagaagattcctatacca 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 386 ttgctcttccttcatttttttaattccttgtctgttgtcagagagaagattcctacacca 327
Query: 543 ggaaca-tttttttttctcagagacataaaaaggtacagattgcaatattttttaanagt 601
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 326 ggaacattttttttttctcagagacataaaaaggtacagattgcaatattttttaaaagt 267
Query: 602 taaatatgaatgttctggatcctaaaatcaagttaattttcttctaatgtgcctggaagt 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 taaatatgaatgttctggatcctaaaatcaagttaattttcttctaatgtgcctggaagt 207
Query: 662 tt 663
||
Sbjct: 206 tt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no308_g20.g1 MSMg01no308_g20.g1 CHROMAT_FILE:
MSMg01no308_g20.g1 PHD_FILE: MSMg01no308_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:44 2005
(286 letters)
>mm_chr12_14764900_14765585
Length = 686
Score = 402 bits (208), Expect = e-116
Identities = 211/212 (99%)
Strand = Plus / Plus
Query: 1 ataactacagatctcaagaacaaatcaaaagcatggagaggaccaaatgatagaatagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataactacagatctcaagaacaaatcaaaagcatggagaggaccaaatgatagaatagaa 260
Query: 61 aatagagcatttataatcattctaaaagtcttagaggagatgataggcaaaccagtgcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatagagcatttataatcattctaaaagtcttagaggagatgataggcaaaccagtgcct 320
Query: 121 cttcccttttcccaaaatatagggtgcatgctaaagcaggtaaaggctttttccatgtct 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcccttttcccaaaatataggatgcatgctaaagcaggtaaaggctttttccatgtct 380
Query: 181 agaataaagtgaaaaataaaaattaactctaa 212
||||||||||||||||||||||||||||||||
Sbjct: 381 agaataaagtgaaaaataaaaattaactctaa 412
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
