Query= MSMg01no309_a17.b1 MSMg01no309_a17.b1 CHROMAT_FILE:
MSMg01no309_a17.b1 PHD_FILE: MSMg01no309_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:31 2005
(321 letters)
>mm_chr12_5637090_5637810
Length = 721
Score = 582 bits (301), Expect = e-171
Identities = 313/317 (98%)
Strand = Plus / Plus
Query: 5 gaattcaaaggcatcatggcatgctcaatcactggtgttaggggtcaacacatcgaggga 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 205 gaattcaaaggcatcatggcatgctcaatcactggtgttaggggtcaacacatcaaggga 264
Query: 65 gggatcggtgtttgattggaacctttgctcattccctgtacaatctaagaaacatggttt 124
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 265 gggatcggtgtttgattggaacccttgctcattccctgtacaatctaagaaacatggttt 324
Query: 125 gctcttcttatcccaacgctgcccacaagaagaaaattctatgttaacgtttcatctctt 184
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 325 gctcttcttatcccaacgctgcccacaagaagaaaattctatgttaacgcttcatctctt 384
Query: 185 gctctctctgacctctagctgcctacccatgagtgcctgcccaggggctcagctttttta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctctctctgacctctagctgcctacccatgagtgcctgcccaggggctcagctttttta 444
Query: 245 ccttatataggcaaaaatcccagctcctagctcacaccccctgcccaaacctcataaacc 304
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccttatatgggcaaaaatcccagctcctagctcacaccccctgcccaaacctcataaacc 504
Query: 305 tccattgttttagcctg 321
|||||||||||||||||
Sbjct: 505 tccattgttttagcctg 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no309_a17.g1 MSMg01no309_a17.g1 CHROMAT_FILE:
MSMg01no309_a17.g1 PHD_FILE: MSMg01no309_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:31 2005
(640 letters)
>mm_chr12_5781649_5782688
Length = 1040
Score = 1054 bits (545), Expect = 0.0
Identities = 554/557 (99%)
Strand = Plus / Minus
Query: 84 tctctgtgagtcttcagctggctgggttgtggtggtgcaaatctgtaatcagaaggcata 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 tctctgtgagtcttcagctggctgggttgtggtggtgcaaatctgtaatcagaaggcata 981
Query: 144 ggcaggcagatctctgagttcatggctagctcagcctacatagtgagttccaggacagcc 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 ggcaggcagatctctgagttcatggctagctcagcctacatagtgagttccaggacagcc 921
Query: 204 aggccacacagggaaaccctgtctcaaaaaaacaaaacaaagaaaaaaacaaaaacaaga 263
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 aggctacacagggaaaccctgtctcaaaaaaacaaaacaaagaaaaaaacaaaaacaaga 861
Query: 264 agaagaacaacaaaaaacaatataaaatgtcttctttgggtgaagctcaaggcgaagtca 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 agaagaacaacaaaaaacaatataaaatgtcttctttgggtgaagctcaaggcgaagtca 801
Query: 324 ctctgtgtggtctgggtaagaaccaaggcctttaaggtaagaagcaaaccttgaatcctt 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ctctgtgtggtctgggtaagaaccaaggcctttaaggtaagaagcaaaccttgaatcctt 741
Query: 384 acaaaaagaaaggaaggggcagagggacttactgcaagataggaggaagcccactcgttt 443
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 740 acaaaaagaaaggaaggggcagagggacttactgcaggataggaggaagcccactcgttt 681
Query: 444 ctgtgttggaagattcctggaccagcatgctctcccaaggaaggtcctcgagaccttgat 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctgtgttggaagattcctggaccagcatgctctcccaaggaaggtcctcgagaccttgat 621
Query: 504 tctgcctggtgtgcaaacgactgctcaatggatcacacaaatacattatacaggacaaaa 563
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 620 tctgcctggtgtgcaaacgactgctcaatggatcacacaaatacattatagaggacaaaa 561
Query: 564 ggactaggctcttgtcatgtcagagaggcagcttaggagaaaggttagtgtgaactgagt 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggactaggctcttgtcatgtcagagaggcagcttaggagaaaggttagtgtgaactgagt 501
Query: 624 ttaagagcacaggcact 640
|||||||||||||||||
Sbjct: 500 ttaagagcacaggcact 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
