CATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCTCTGTCCTTTTACTGACGTGTCCAGAAATTTTATTAAATGT
TTCTTATACCTAGAAAATATCTTTAATATTTGATTGTTAACACTACAAAT
ATAACTAATTCTGGAAGTTAATATTAGGAAATTAAATTCCATTTAATAAT
TATGGGCATAGTGGTGAGTGCCTAAAGGCCTAGCTCTAGGAGACTGAGGT
TAGAAGATCATTAGTGAAAGATATCCTGGACTACATGAAAAAAATTTGTA
ATCGACAACACAAAAACAAACAAACAAACAAACAAACAAACAAACAGGGA
ACCTTTATCAACATGTAATCATGTCCATACAAATTCATAGAGCAAGTGAT
TTAAAGTTTAACTGCCAAACCTTCTATTTTGACTGAATACTGTGACCTAT
GTTTGAATGTCCTAATTTTCTTTGCCACATTGTCAAATTTTACAGAATTT
CATCATATCAATAAAATTCAGTGGGAAATAATTTACAAATGAAATAATTC
AGTGCTCAATGAATGCTTCAAGATGTAAATTTTACTAGAATAATTTATAC
GTTGTAATTTCTCAACAATACTTTGTGTTTCTACAACCATTTCATGTTAT
TTTAGAGATTTTTTTAGCAAAAAAAGAAATATTGCTAGATGCAGCCACTC
TAGGAAAGCTTTTCTTACATATCTGTGATCATATGN

ACGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTAAAGAAAACCCAAACATAGGTA
AAACAAGAAATGAAAAATTAGAACTTCAAACAGAAACCTTAGAGGAAAGC
CTCATCAACAGAATACAAGATATGCAAGAGAGAATCCCAGGCACTGAATA
CAAGATAAACGAAATGGATACCACAGCCAGAGAAAATGAAAAATGAATAA
ACAAACAAACAAACAAACAAACAAAAACATACATAGGCACAAAACATCCA
GGACATTTGGGACATTGTGAAAAGACAAAACCTATAAGTATAATAGGCAT
AGAGGAAGGAGAAGAAATTCAGGGCAAATACATTGAAAATACTTTTAACA
AACTTATAGGTGAAAACATTTCTAACCTAAAGAAGATGTGAAGGGATATT
AAAAGTTGAAAGGTAAAAAGACTAAATAATATATAAAGGCAGACTTATAA
GAATAACACCTAACTTTTCAATGGCAACTCTAAAAGCTAAAGGTGTTCTA
CAAGCTGTAAGAGACCACAGATTCCAGCCCAGATTAGTATGCTTAGCAAA
GCTTTCAATCACAATGGATAGAGAAAGAGTTTGCATGAAAATATCAAACT
TCTACAAATCTGTCTCTACTGATACTGCTAGGAGGAAAATTTCAACCAGG
AGAACTTAGCCACACCAAAGATACACGTAGAATTAATAATATCAGACC

Query= MSMg01no315_a14.b1 MSMg01no315_a14.b1 CHROMAT_FILE:
MSMg01no315_a14.b1 PHD_FILE: MSMg01no315_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:24 2005
         (683 letters)



>mm_chr12_39918413_39919495
          Length = 1083

 Score = 1222 bits (632), Expect = 0.0
 Identities = 671/686 (97%), Gaps = 8/686 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctctctgtcc-ttttactgacgtgtccagaaattttattaaatgtttcttatac 62
           ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ggaattctctctg-ccattttactgacgtgtccagaaattttattaaatgtttcttatac 258

                                                                       
Query: 63  ctagaaaatatctttaatatttgattgttaacactacaaatataactaattctggaagtt 122
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctcgaaaatatctttaatatttgattgttaacactacaaatataactaattctggaagtt 318

                                                                       
Query: 123 aatattaggaaattaaattccatttaataattatgggcatagtggtgagtgcctaaaggc 182
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 319 aatattaggaaattaaattccatttaataattatgggcatagtggtgagtgccttaaggc 378

                                                                       
Query: 183 ctagctctaggagactgaggttagaagatcattagtgaaagatatcctggactacatgaa 242
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ccagctctaggagactgaggttagaagatcattagtgaaagatatcctggactacatgaa 438

                                                                       
Query: 243 aaaaatttgtaatcgacaacacaaaaacaaacaaacaaacaaacaaacaaacaaaca--- 299
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 439 aaaaatttgtaatcgacaacacaaaaacaaacaaacaaacaaacaaacaaacaaacaaac 498

                                                                       
Query: 300 -gggaacctttatcaacatgtaatcatgtccatacaaattcatagagcaagtgatttaaa 358
            ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agggaacctttagcaacatgtaatcatgtccatacaaattcatagagcaagtgatttaaa 558

                                                                       
Query: 359 gtttaactgccaaaccttctattttgactgaatactgtgacctatgtttgaatgtcctaa 418
           |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 559 gtttaactgccaaagcttctattttgactgaatactgtgacctatatttgaatgtcctaa 618

                                                                       
Query: 419 ttttctttgccacattgtcaaattttacagaatttcatcatatcaataaaattcagtggg 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ttttctttgccacattgtcaaattttacagaatttcatcatatcaataaaattcagtggg 678

                                                                       
Query: 479 aaataatttacaaatgaaataattcagtgctcaatgaatgcttcaagatgtaaattttac 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aaataatttacaaatgaaataattcagtgctcaatgaatgcttcaagatgtaaattttac 738

                                                                       
Query: 539 tagaataatttatacgttgtaatttctcaacaatactttgtgtttctacaaccatttcat 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tagaataatttatacgttgtaatttctcaacaatactttgtgtttctacaaccatttcat 798

                                                                       
Query: 599 gttattttagagattttttt-agcaaaaaaagaaatattgctagatgcagccactctagg 657
           |||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||
Sbjct: 799 gttattttagagattttttttagcaaaaag-gaaatattgctagatgcagccactctagg 857

                                     
Query: 658 aaagcttttcttacatatctgtgatc 683
           ||||||||||||||||||||||||||
Sbjct: 858 aaagcttttcttacatatctgtgatc 883


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space:   722129
Effective search space used:   722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)