Query= MSMg01no316_n06.b1 MSMg01no316_n06.b1 CHROMAT_FILE:
MSMg01no316_n06.b1 PHD_FILE: MSMg01no316_n06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:41 2005
(300 letters)
>mm_chr12_81786681_81787380
Length = 700
Score = 497 bits (257), Expect = e-145
Identities = 285/295 (96%), Gaps = 4/295 (1%)
Strand = Plus / Minus
Query: 5 gaattcaaggtaatatcctgccttaagtggggagagggccttctaatactcaacactgta 64
||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 341 gaattcaaggtaagaccctgccttaagtggggagagggccttccaatactcaacactgta 282
Query: 65 ttagcttggagtgtcgcacaaatcccaaggaaaattaacttctggttctcaaagtattac 124
|||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 281 ttagcttggagtgttgtacaaatcccaaggaaagttaacttctggttctcaaagtattac 222
Query: 125 ataaatttttgtctatgagccgggtgtggtggcgcacgcctttaatcccagcactcagga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 ataaatttttgtctatgagccgggtgtggtggcgcacgcctttaatcccagcactcagga 162
Query: 185 ggcagaggcaggtggatttctgggttcgagaccctggtctacaaagtgagttccaggaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 ggcagaggcaggtggatttctgggttcgagaccctggtctacaaagtgagttccaggaca 102
Query: 245 gtcagggttacacagagaaaccctgcctgggg-ggagggttggggggggaagatc 298
|||||||||||||||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 101 gtcagggttacacagagaaaccctgcctggggtgg-gggttgggggg--aagatc 50
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 700
Length adjustment: 9
Effective length of query: 291
Effective length of database: 691
Effective search space: 201081
Effective search space used: 201081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no316_n06.g1 MSMg01no316_n06.g1 CHROMAT_FILE:
MSMg01no316_n06.g1 PHD_FILE: MSMg01no316_n06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:41 2005
(341 letters)
>mm_chr12_81601293_81602032
Length = 740
Score = 594 bits (307), Expect = e-174
Identities = 328/335 (97%), Gaps = 1/335 (0%)
Strand = Plus / Plus
Query: 5 ttaccttgcttccaggatttttttttccatttgtttatcttttaactctcttcactaggt 64
||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 205 ttaccttgcttccagga-ttttttttccatttgtttatcttttaattttcttcactaggt 263
Query: 65 ctcattaaaaatgtactttacatttttgtatatgggctgtttgtatgtgcatgggttcat 124
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctcatttaaaatgtactttacatttttgtatatgggctgtttgtatgtgcatgggttcat 323
Query: 125 gtatgacagacaagctcaggatagtcctctccttctgctgcgagagtccctgggatccag 184
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 324 gtatgacagacaagctcaggatagtcctctccttctgctgtgagagtccctgggatccag 383
Query: 185 ctggcatggtgctaagtttcctcttcccactgagccactgaaccttctcatggtttatta 244
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 384 ctggcatggtgctaagtttcctcttcccactgagccactgagccttctcatggtttatta 443
Query: 245 agggacactccccaagaatgggagtgagcaagtggatccaggggagcaatttcccccaaa 304
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 444 agggacactccccaagaatgggagtgagcaagtggagccaggggagcaatttcccccaaa 503
Query: 305 gatttgatagcttactaattattatgtatttgaaa 339
|||||||||||||||||||||||||||||||||||
Sbjct: 504 gatttgatagcttactaattattatgtatttgaaa 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 740
Length adjustment: 9
Effective length of query: 332
Effective length of database: 731
Effective search space: 242692
Effective search space used: 242692
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
