Query= MSMg01no317_k10.b1 MSMg01no317_k10.b1 CHROMAT_FILE:
MSMg01no317_k10.b1 PHD_FILE: MSMg01no317_k10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:41 2005
(592 letters)
>mm_chr12_6871228_6872219
Length = 992
Score = 752 bits (389), Expect = 0.0
Identities = 425/437 (97%), Gaps = 2/437 (0%)
Strand = Plus / Minus
Query: 157 cactcctgcacggtatatgagtgtttctgtagctctgaactcttggcataatgtgtgaca 216
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 cactcctgcagggtatatgagtgtttctgtagctctgaactcttggcataatgtgtgaca 933
Query: 217 atactgtttaactcaaatataaagtggtatttcactgttgttctgactcgcacatttctg 276
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 932 atactgtttaactcaaatataaagtggtatttcactgttgttgtgactcgcacatttctg 873
Query: 277 ataacttaagattttgagcatattcttgtgtatgagccataccaaaggttttctttgtaa 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 ataacttaagattttgagcatattcttgtgtatgagccataccaaaggttttctttgtaa 813
Query: 337 gatgcttgtttaca-ccttttcttggaagaattttctaaattgccattttggtgcttttg 395
||||||| |||| | |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 812 gatgcttattta-agccttttcttggaagaattttgtaaattgccattttggtgcttttg 754
Query: 396 aggtaataatttgtttacttgaaacaaaccattactaacatatgtgtgagtattttctgt 455
|||||||||||||| |||||| |||||||||||| ||| |||||||||||||||||||||
Sbjct: 753 aggtaataatttgtatacttggaacaaaccattaataaaatatgtgtgagtattttctgt 694
Query: 456 cactttctgagttgcctatttatatgttgccttttgtttagattttttgttgttgtttca 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 cactttctgagttgcctatttatatgttgccttttgtttagattttttgttgttgtttca 634
Query: 516 aggagtccattttaccataagtgtattctctaataggtttatactagtaccttttgtaac 575
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 aggagtccattttaccataagtgtattctctaataggtttatactagtaccttttgtaag 574
Query: 576 agaattttgcttttgtc 592
| |||||||||||||||
Sbjct: 573 aaaattttgcttttgtc 557
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_k10.g1 MSMg01no317_k10.g1 CHROMAT_FILE:
MSMg01no317_k10.g1 PHD_FILE: MSMg01no317_k10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:41 2005
(642 letters)
>mm_chr12_6694747_6695789
Length = 1043
Score = 1106 bits (572), Expect = 0.0
Identities = 624/644 (96%), Gaps = 9/644 (1%)
Strand = Plus / Plus
Query: 1 catagaaccagagagcaaagccatttaattggctaagcttgagtattgaagagggtgggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catagaaccagagagcaaagccatttaattggctaagcttgagtattgaagagggtgggc 260
Query: 61 aacggtgcataggcttctccacattaaccttattactgcaggagctgtgagatgaagatg 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 aacggtgcataggcttctccacattaaccgtattactgcaggagctgtgagatgaagatg 320
Query: 121 ctaactaac-taagaattaggaagaaagatgccagacagcctgagctttagctaactaaa 179
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaactaaccta-gaattaggaagaaagatgccagacagcctgagctttagctaactaaa 379
Query: 180 gatgaaaaaggagaatcttgtgaaggaaaaatgttttacgtgaaagcaatctttttcaaa 239
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 380 gatgaaaaaggagaatcttgtgaaggaaaaatgttttatgtgaaagcaatctttttcaaa 439
Query: 240 gagctaccttctgatattatattaaaaagttaatgatttagagtagagaatatgaagtat 299
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 440 gagctaccttctgaaattatattaaaaagttaatgatttagagtagggaatatgaagtat 499
Query: 300 gagactataaaatataaaaatataggtctgaattacttttt-ggtaacaccaatattata 358
|||||||||||||||||||| |||||||||||||||||||| ||||| | |||||||||
Sbjct: 500 gagactataaaatataaaaaaataggtctgaattacttttttggtaatagtaatattata 559
Query: 359 ataaatgtacagtatacagcttcactgatgcttctgagttttcaaaatgaaggtgagcat 418
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 560 ataaatgtacagtatacagcttcactgatgcttctgagttttaaaaatgaaggtgagcat 619
Query: 419 cttcctcccttccattctgtagcctcttgattttctgcttcagtgttcctctaggttatt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cttcctcccttccattctgtagcctcttgattttctgcttcagtgttcctctaggttatt 679
Query: 479 tactaaaaccaaagaattcagagcaatgaactatagttaagatagatcctatgatgccag 538
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 680 tactaaaaccaaagaattcagagcaatgaactatagttaagatagatcctgtgatgccag 739
Query: 539 tctttcggttcaaaattaacttaatcaatgtaatattgttcagctccttcaatttacctg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tctttcggttcaaaattaacttaatcaatgtaatattgttcagctccttcaatttacctg 799
Query: 599 catttcatggtggtggtgtgtgtgcgtgtatgtgtgtgagtgtg 642
|||||||||||||||||| ||| ||||||||||| |||||
Sbjct: 800 catttcatggtggtggtg-gtg-----gtatgtgtgtgtgtgtg 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1043
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1033
Effective search space: 652856
Effective search space used: 652856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
