Query= MSMg01no318_l05.b1 MSMg01no318_l05.b1 CHROMAT_FILE:
MSMg01no318_l05.b1 PHD_FILE: MSMg01no318_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:55 2005
(101 letters)
>mm_chr12_112600110_112600608
Length = 499
Score = 184 bits (95), Expect = 1e-51
Identities = 99/101 (98%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 1 aggatgtttctaagactgtaaatacaatcctctaagtaaagtttcatgccatcaacaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggatgtttctaagactgtaaatacaatcctctaagtaaagtttcatgccatcaacaaga 260
Query: 61 actactgcagtaggaaaaaaaaaataaataactgtcaagaa 101
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 actactgcagtaggaaaaaaaaaa--aataactgtcaagaa 299
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 101
Length of database: 499
Length adjustment: 8
Effective length of query: 93
Effective length of database: 491
Effective search space: 45663
Effective search space used: 45663
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no318_l05.g1 MSMg01no318_l05.g1 CHROMAT_FILE:
MSMg01no318_l05.g1 PHD_FILE: MSMg01no318_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:55 2005
(253 letters)
>mm_chr12_112787874_112788526
Length = 653
Score = 455 bits (235), Expect = e-132
Identities = 247/251 (98%)
Strand = Plus / Minus
Query: 1 acatgctaaattgcaattggaacatataaactgaaataaatattttctcccccagttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 582 acatgctaaattgcaattggaacatataaactgaaataaatattttctctccaagttgct 523
Query: 61 ttttgtaatggtgtgatttgttctgttctgttgtgggtttttgttttgctttgcttttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ttttgtaatggtgtgatttgttctgttctgttgtgggtttttgttttgctttgcttttat 463
Query: 121 atctgtcttgtacaaattggcattgacagctacttctgtgagggactaaaagcctgagtg 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 462 atctgtcttgtacaaattggcattgacagttacttctgtgagggactaaaagcctgagtg 403
Query: 181 ctttatttcatttctgatcatgttgttcacccattgatagcagctgatgtcctactgttt 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ctttatttcatttctgagcatgttgttcacccattgatagcagctgatgtcctactgttt 343
Query: 241 tctattgctgt 251
|||||||||||
Sbjct: 342 tctattgctgt 332
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 653
Length adjustment: 9
Effective length of query: 244
Effective length of database: 644
Effective search space: 157136
Effective search space used: 157136
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
