XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTTCA
GAGATCACTGCCAAGGCAGGGACTTGTACTTCCCAGGTGGCTGTTGATGG
CTAAGAGTCAGGTGGAGCATTTTGTGAGCAGGTGCTATAATGTAGAGAGG
GTATAAATGGGTGGGGCATCACATGATTACAGGGAAAGTTGTTCATCACG
TAATTCTAGAAGGAACTGTTCACACAAACAATGCCATGCACATATCTACC
TGGAGTTCTGAAGTGTGCCAGTTCTAATTCCCAAAGACTCACAGAGATCT
GCCTGGCTCTGCCTCCTGAGTGCTGGGATTAAAGACATGTCACCACCACC
CAGTTGAAAATTTTTAAGGAAGAAATATGACAGGATTTTTACACAGTGTA
CTCTGCTAAACCCCCCCGGCACTTCAGAATGCAGTATAGTTTTGTAGTAT
TAGTAATGGGGATGCGGCGCAGTGGTAGGCCTCTTACTGCACTTGTGCAA
AGCTCTGGGTTGAGTTTGGTCCACAGCATCACAAGAAAACTAATACAGAA
ACTCCTGATAATTCTAGAGTATTCTTAACAACTTCAAGTGTCAAATAAAT
GTTTCTTTTNTAAAAATGGTATGGTCAAACAATGACTGGCCCAGGTTGAG
ACCTATGCTGTGTAAGTGAGCCCACCCCAGACACTATCAATGATAGTCTA
CTATATGTAAATTACAGACAGGAGTGTATGATAT

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTTTGTTTAGTTCTGTACCCCATTTTTAATAGGGTT
ATTTGGCTAACTTGCTCAAAGCAAACTACAGATTTAATGCAATTCCCATC
AAAATTCCAACTCAATTCTTCACAGAGTTAGAAAGGGCAATTTGCAAATT
CATCTGGAATAACAAAAAACTTAAGATTGCAAAAACTATTCTCAACAATA
AAAGAAACTCTGGTGGAATCACCATCCCTGACCTCAAGCTGTACTACAGA
GCTATTGTGATAAAAACTGCATGGTACTGGTATAGTGACAGACAGGCAGA
TCAATGGAATATAGTTGAAGACCCACAAATGAACCCACACACCTATGGTC
ACTTGATCTTTCACCACCCAGCTAAAACCATCCAGTGAAAAAAAGACAAC
ATTTTCAACAAATGGTGCTGGTTCAACTAGTGGTTAGCGTGTTGAAGTAT
TTGAATTGATCCATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAATGGA
TCAAGGACCTCCACATAAAACCAGAGACACTTACAGAGGAGAAAGTGGGG
AAAAGCCTCGAAGATATGGGCACATGAGAAAAAATCCTTATGAGAACAGC
AATGGCTTGTGCTGGAAGATCAAGAATCAACATTTTGGACCTCATAAATT
TGAAAAGCTTCTGTAAGGCATAGGACACTGTCAATGT

Query= MSMg01no318_m20.b1 MSMg01no318_m20.b1 CHROMAT_FILE:
MSMg01no318_m20.b1 PHD_FILE: MSMg01no318_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:02 2005
         (548 letters)



>mm_chr12_75748270_75749217
          Length = 948

 Score =  998 bits (516), Expect = 0.0
 Identities = 540/548 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccaaggcagggacttgtacttcccaggtggctgttgatggctaagagtcaggtggagcat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 ccaaggcagggacttgtacttcccaggtggctgttgatggctaagagtcaggtggagcat 832

                                                                       
Query: 61  tttgtgagcaggtgctataatgtagagagggtataaatgggtggggcatcacatgattac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 tttgtgagcaggtgctataatgtagagagggtataaatgggtggggcatcacatgattac 772

                                                                       
Query: 121 agggaaagttgttcatcacgtaattctagaaggaactgttcacacaaacaatgccatgca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 agggaaagttgttcatcacgtaattctagaaggaactgttcacacaaacaatgccatgca 712

                                                                       
Query: 181 catatctacctggagttctgaagtgtgccagttctaattcccaaagactcacagagatct 240
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 711 catatctacctggagttctgaagtgtgccagctctaattcccaaagactcacagagatct 652

                                                                       
Query: 241 gcctggctctgcctcctgagtgctgggattaaagacatgtcaccaccacccagttgaaaa 300
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gcctagctctgcctcctgagtgctgggattaaagacatgtcaccaccacccagttgaaaa 592

                                                                       
Query: 301 tttttaaggaagaaatatgacaggatttttacacagtgtactctgctaaacccccccggc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||
Sbjct: 591 tttttaaggaagaaatatgacaggatttttacacagtgtactctgctaaactcctacggc 532

                                                                       
Query: 361 acttcagaatgcagtatagttttgtagtattagtaatggggatgcggcgcagtggtaggc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 acttcagaatgcagtatagttttgtagtattagtaatggggatgcggcgcagtggtaggc 472

                                                                       
Query: 421 ctcttactgcacttgtgcaaagctctgggttgagtttggtccacagcatcacaagaaaac 480
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ctcttgctgcacttgtgcaaagctctgggttgagtttggtccacagcatcacaagaaaac 412

                                                                       
Query: 481 taatacagaaactcctgataattctagagtattcttaacaacttcaagtgtcaaataaat 540
           ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 411 taaaacagaaactcctgataattctagaatattcttaacaacttcaagtgtcaaataaat 352

                   
Query: 541 gtttcttt 548
           ||||||||
Sbjct: 351 gtttcttt 344


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space:   504644
Effective search space used:   504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)