Query= MSMg01no322_g12.b1 MSMg01no322_g12.b1 CHROMAT_FILE:
MSMg01no322_g12.b1 PHD_FILE: MSMg01no322_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:21 2005
(321 letters)
>mm_chr12_87110816_87111534
Length = 719
Score = 451 bits (233), Expect = e-131
Identities = 294/315 (93%), Gaps = 4/315 (1%)
Strand = Plus / Plus
Query: 5 gaattccatatgctacctatcatcataggtcaaacgaacctttccattttggccagtcat 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatatgctacctgtcatcataggtcaaacgaacctttccattttggccagtcat 264
Query: 65 tgtatcttctcttatctcacattctacctcctgttcctgtatcttctcgtttgaaagcag 124
|||| |||||||||||||||||||||||| ||||||||||||| || |||||| |||||
Sbjct: 265 tgtaccttctcttatctcacattctacctgctgttcctgtatc--ct-gtttgacagcag 321
Query: 125 accaagtgacaaatgaaagtcagtgaatgcaggctattgtccccttggcttaccatgtaa 184
|||||||||||||||||| ||||| |||||||||||||| || ||||||||||||||||
Sbjct: 322 gccaagtgacaaatgaaagccagtggatgcaggctattgttcctttggcttaccatgtaa 381
Query: 185 ctttgggagacagggcaacatagccttattttatttactggac-cacggttgcatgtgta 243
|||||||||||||| |||||||||||||||||||||||| ||| || |||||||||||||
Sbjct: 382 ctttgggagacaggacaacatagccttattttatttactagacacatggttgcatgtgta 441
Query: 244 ccacacgcacccactgcactagaggtgcaatgtgaacaggaaggacagggttctgcacct 303
| || |||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 442 ctgcatgcacccgctgcactagagatgcaatgtgaacaggaaggacagggttctgcacct 501
Query: 304 gtagggtttacactc 318
|||||||||||||||
Sbjct: 502 gtagggtttacactc 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 719
Length adjustment: 9
Effective length of query: 312
Effective length of database: 710
Effective search space: 221520
Effective search space used: 221520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_g12.g1 MSMg01no322_g12.g1 CHROMAT_FILE:
MSMg01no322_g12.g1 PHD_FILE: MSMg01no322_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:22 2005
(288 letters)
>mm_chr12_87288082_87288772
Length = 691
Score = 485 bits (251), Expect = e-141
Identities = 279/293 (95%), Gaps = 12/293 (4%)
Strand = Plus / Minus
Query: 1 tctctcctccccaaccaaaaaaaaaaaaaaaaaaaaaagcactgtagcatcccacaaaat 60
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 524 tctctcctccccaacc-----aaaaaaaaaaaaaaaaagcactg-agcatcccacaaaat 471
Query: 61 aatc----tgataagggcctaattcaataagtagccaatcacctcgatgataataaaccc 116
|||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 470 aatctgattgataagggcctaattcaataagtagccaatcaccttgatgat-ataaaccc 412
Query: 117 tgcatgtgggaagagagagcgcttgtaaccatgaaagcagatatctctggtatagtctgg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tgcatgtgggaagagagagcgcttgtaaccatgaaagcagatatctctggtatagtctgg 352
Query: 177 tgtctc-gcagacttaagaaaaggagtagtgatatgatagttctgcagtggtggtgcacc 235
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 351 tgtctctgcagacttaagaaaaggagtagtgatatgatagttctgcagtggtggtgcgcc 292
Query: 236 agagcgggctggtgtgatgctcggtcatttcagcctaaggaaagagctacttc 288
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 agagcgggctggtgtgatgctcggtcatttcagcctaaggaaagagctacttc 239
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 691
Length adjustment: 9
Effective length of query: 279
Effective length of database: 682
Effective search space: 190278
Effective search space used: 190278
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
