Query= MSMg01no322_h13.b1 MSMg01no322_h13.b1 CHROMAT_FILE:
MSMg01no322_h13.b1 PHD_FILE: MSMg01no322_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:26 2005
(313 letters)
>mm_chr12_26412207_26412918
Length = 712
Score = 553 bits (286), Expect = e-162
Identities = 304/310 (98%), Gaps = 1/310 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttaaatatgtcctgatattgtctccaaagtggtgttttgtttctagataatag 63
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttaaataagtattgatattgtctccaaagtggtgttttgtttctagataatag 263
Query: 64 gacatttttttcttcccttttaatttaaatgagaagttacatttaaaaagttgattagaa 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gacatttttttctttccttttaatttaaatgagaagttacatttaaaaagttgattagaa 323
Query: 124 tttccctcaagtcaaacagcaccaattaccaagtaagaatatcatcgatggcatatgctc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttccctcaagtcaaacagcaccaattaccaagtaagaatatcatcgatggcatatgctc 383
Query: 184 ctcattcctctctgatgttgtattctgccatttatcctgtctcttaaggggatcctttgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctcattcctctctgatgttgtattctgccatttatcctgtctcttaaggggatcctttgg 443
Query: 244 cttctagtgtatgatgaaccatcactatgtatttttttgtattaatgcaaccctgcattc 303
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 444 cttctagtgtatgatgaaccatcactatgtattttct-gtattaatgcaaccctgcattc 502
Query: 304 tgaataaaga 313
||||||||||
Sbjct: 503 tgaataaaga 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 712
Length adjustment: 9
Effective length of query: 304
Effective length of database: 703
Effective search space: 213712
Effective search space used: 213712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_h13.g1 MSMg01no322_h13.g1 CHROMAT_FILE:
MSMg01no322_h13.g1 PHD_FILE: MSMg01no322_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:26 2005
(287 letters)
>mm_chr12_26568278_26568964
Length = 687
Score = 489 bits (253), Expect = e-143
Identities = 279/290 (96%), Gaps = 6/290 (2%)
Strand = Plus / Minus
Query: 1 taatttcaaggctacagtgtcccaagtggaaatctgaaagccacacccgattgtgctccc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 487 taatttcaaggctacagtgtcccaagtggaaatctgaaagccacacctgattgtgctccc 428
Query: 61 gaagatctgagccctcaggtgcctctttaaggggggagacagccaatccttgagcagggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gaagatctgagccctcaggtgcctctttaaggggggagacagccaatccttgagcagggt 368
Query: 121 ccctttcttctcacagatgggcaagactttcttggtcctaattttttctgcagtatttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 367 ccctttcttctcacagatgggcaagactttcttggtcctaattttttctgcagtaagcca 308
Query: 181 ggtggtaggcccgttgagattgcagcaggcagtcatgccagcttgctgcttctctagatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggtggtaggcccgttgagattgcagcaggcagtcatgccagcttgctgcttctctagatg 248
Query: 241 atgna---tantgttgaatggacaccttctttgaaatcaatagtgatttg 287
| | | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 247 a-ggatttt--tgttgaatggacaccttctttgaaatcaatagtgatttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
