Query= MSMg01no323_h05.b1 MSMg01no323_h05.b1 CHROMAT_FILE:
MSMg01no323_h05.b1 PHD_FILE: MSMg01no323_h05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:07:00 2005
(339 letters)
>mm_chr12_99105648_99106386
Length = 739
Score = 615 bits (318), Expect = e-180
Identities = 333/338 (98%)
Strand = Plus / Minus
Query: 1 agctggctgtatgccttttcagtgtgttctctctatcagtagttgaacatccccttaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 agctggctgtatgccttttcagtgtgttctctctatcagtagttgaacatccccttaatt 630
Query: 61 cccagaatcacaggactttctaggctaagtttaatttccttgtcacagaactattgtcaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 629 cccagaatcacaggactttctaggctaagtttaatttccttgtcacagaactgttgtcaa 570
Query: 121 ccaatctcctcagaagttctggctctctttattttcaaagtaaaatatagttgtgcccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ccaatctcctcagaagttctggctctctttattttcaaagtaaaatatagttgtgcccat 510
Query: 181 tgctcctaggtgccattaactctgggcacttggcagatacagggagagcatatggaaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 509 tgctcctaggtgccattaactctgggcacttggcagatacagggagagcatatggcaaac 450
Query: 241 agcataccagtttccctttcttctatcagcatgagctgataaaagaattaaataccacac 300
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ggcatacgagtttccctttcttctatcagcatgagctgataaaagaattaaataccacac 390
Query: 301 tcataagtaatataatcaataactgactaacagattaa 338
||| ||||||||||||||||||||||||||||||||||
Sbjct: 389 tcacaagtaatataatcaataactgactaacagattaa 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no323_h05.g1 MSMg01no323_h05.g1 CHROMAT_FILE:
MSMg01no323_h05.g1 PHD_FILE: MSMg01no323_h05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:07:00 2005
(279 letters)
>mm_chr12_98949976_98950655
Length = 680
Score = 464 bits (240), Expect = e-135
Identities = 263/276 (95%), Gaps = 11/276 (3%)
Strand = Plus / Plus
Query: 2 ccttagatgaagggcctaagctcatttgaaacaatctcatctttactaaacaaatctttc 61
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ccttagatggagggcctaagctcatttgaaacaatctcatctttactaaacaaatctttc 261
Query: 62 aaggaatctatttcatataaagactgatcttgcagatagaaacaaacttctagtgaacaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aaggaatctatttcatataaagactgatcttgcagatagaaacaaacttctagtgaacaa 321
Query: 122 cacaaaccagtatgatatgtcgtagggttaataaaacatgattataagtttctatcttct 181
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 322 cacaaaccagtatgatatgtcgtagagttaataaaacatgattataagtttctatcttct 381
Query: 182 aaaaaaaa-gtttaacaataataatttttcaaaagtaggttatgctatttttataatgca 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aaaaaaaaagtttaacaataataatttttcaaaagtaggttatgctatttttataatgca 441
Query: 241 cggggcggtgggggggggggataatttggggaagtt 276
||||| |||||| |||||||||||||||
Sbjct: 442 cgggg----gggggg------taatttggggaagtt 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 680
Length adjustment: 9
Effective length of query: 270
Effective length of database: 671
Effective search space: 181170
Effective search space used: 181170
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
