CCCATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCATCATATTCAATGGCCAAGAAGCACCTAAAGAAATGTTCAC
CACCCTTAGTCATCAGGGAAATGTAAATCAAAACAACCCTGAGATTCCAC
CTCACACCAATCAGAATGGCTAAAATCAAAAATTCAGGTGACAGCAGATG
CTGTTGAGAATGCTGGGAACAAAGAACACTCCTCCATTGCTGGTGGGATT
GCAAGTTGCTACAACATCTCTGGAAATCAGTTTGGTGGTTCCTACTACCT
GAGCACCCAGCTATACCACTCCTGGGCCCAGAAGATTCTTCAACATGTAA
GAAGGACATATGCTCCACTATGTTCATCTCATGCTTATTTATAATAACCA
GAAGCTGGAAAGAACCCACATGTCCTTCAACAGAGGAATGGATACAGAAG
ATGTGGTCCATTTACACAATCGAATACCACTCAGCTATTAAAAATGAATT
CATTTCCAAATCCTTAACCCAGAAGGGCTACCATCTAAAGGAAATATGGG
GACAAAGTGTGGAGCAGAGATTGTAGGGAAAGCTGTTCAGAGACTCCCCA
CCTGGGGATTCAGACACCTGGGGATACAGACACCAAACCCAGACACTATT
GCTGAAGTGCTTGCTGACAGAAACCTGATATAGCTGTCTCCTGAGAGGTT
CTGCCAGAGCC

TTCACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGTGGTCCTAACGTAAGAG
TTCTTACATATTAGAAGAGGAACAGGAAAAAAAAAAAAAAAGCAGAGTTA
AGATTCCTTCGCTGAATTACGTTTTGTCTCAGAGAGCTGGAAAATCTACT
CCATATCATCTGTCAGAGGAAAGAGGTCTTCCTGAACGTACAGAAGCTTA
AAATTGATTCCAAATGTTACTACCAAGTTTTGCCAACATTTAATTTTGAA
ACTGAAAACCTTACCTACCTTGTCTCTATTGAGTTTTTCTGTGAAATTGG
GACATAAGTTTTTTACACTTCTAGGTATTTTCTAAGATGTGTGAAGTAAT
GGGTAATGTTTGTGAGGAGGCCACCACCCACCTGTAAGGTTTTATTACTA
ACATTGTAGCCAGGTCCATAGCTGGTTTTTGATGTGGAGATACTTGAGAG
TGGTCCAATTTCCTTCCATCTGGATGCAAGTGAACGGACATCCTTTATGA
AAGACTTATTGTAATAACTGCTGAGTTCTGCTTAGGGGACAGAAAGCTGC
TTCCAGGTTTTACTGAATAAAACAATCTGTTTTATTGTGAAGGTCTCTTA
GAGTTCAGCACAGGGGTCCCTGGGATTTAAAGGTTCTCCCTCAGTCGCCA
TCCTTACAGGATAGG

Query= MSMg01no324_g07.g1 MSMg01no324_g07.g1 CHROMAT_FILE:
MSMg01no324_g07.g1 PHD_FILE: MSMg01no324_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:42 2005
         (549 letters)



>mm_chr12_39562124_39563069
          Length = 946

 Score = 1000 bits (517), Expect = 0.0
 Identities = 540/549 (98%), Gaps = 3/549 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagtggtcctaacgtaagagttcttacatattagaagaggaacaggaaaaaaaaaaaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 201 cagtggtcctaacgtaagagttcttacatattagaagaggaacaggaaaaaaaaaaaa-- 258

                                                                       
Query: 61  agcagagttaagattccttcgctgaattacgttttgtctcagagagctggaaaatctact 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 -gcagagttaagattccttcgctgaattacgttttgtctcagagagctggaaaatctact 317

                                                                       
Query: 121 ccatatcatctgtcagaggaaagaggtcttcctgaacgtacagaagcttaaaattgattc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ccatatcatctgtcagaggaaagaggtcttcctgaacgtacagaagcttaaaattgattc 377

                                                                       
Query: 181 caaatgttactaccaagttttgccaacatttaattttgaaactgaaaaccttacctacct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 caaatgttactaccaagttttgccaacatttaattttgaaactgaaaaccttacctacct 437

                                                                       
Query: 241 tgtctctattgagtttttctgtgaaattgggacataagttttttacacttctaggtattt 300
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 438 tgtctctattgagtttttctgtgaaattgggacataagatttttacacttctaggtattt 497

                                                                       
Query: 301 tctaagatgtgtgaagtaatgggtaatgtttgtgaggaggccaccacccacctgtaaggt 360
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 498 tctaagatgtgtgaagtaatgggtaatgtttgtgaggagggcaccacccacctgtaaagt 557

                                                                       
Query: 361 tttattactaacattgtagccaggtccatagctggtttttgatgtggagatacttgagag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tttattactaacattgtagccaggtccatagctggtttttgatgtggagatacttgagag 617

                                                                       
Query: 421 tggtccaatttccttccatctggatgcaagtgaacggacatcctttatgaaagacttatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 618 tggtccaatttccttccatctggatgcaagtgaacggacatcctttatgaaagacctatt 677

                                                                       
Query: 481 gtaataactgctgagttctgcttaggggacagaaagctgcttccaggttttactgaataa 540
           |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 678 gtaataactgctgagttctgcttaggggacaggaagctgcttccaggttttattgaataa 737

                    
Query: 541 aacaatctg 549
           |||||||||
Sbjct: 738 aacaatctg 746


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 946
Length adjustment: 10
Effective length of query: 539
Effective length of database: 936
Effective search space:   504504
Effective search space used:   504504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)