Query= MSMg01no324_j20.b1 MSMg01no324_j20.b1 CHROMAT_FILE:
MSMg01no324_j20.b1 PHD_FILE: MSMg01no324_j20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:58 2005
(572 letters)
>mm_chr12_77620462_77621433
Length = 972
Score = 837 bits (433), Expect = 0.0
Identities = 481/497 (96%), Gaps = 8/497 (1%)
Strand = Plus / Plus
Query: 5 gaattcagttcctcattgctacttatcacatttctctgtgggtgcatggatgcatttgtg 64
||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagttcctcagtggtactaatcacatttctctgtgggtgcatggatgcatttgtg 264
Query: 65 catgtgctttgtgtgtgtacatgggcatgcatgtgtgtgcatgccttgatgtgttgggtt 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 265 catgtgctttgtgtgtgtacatgggcatgcatgtgtgtgcacgccttgatgtgttgggtt 324
Query: 125 ttaattttactgagacagggtcttatgtgagaagtctaggatggactcaaactagtgagt 184
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttaattttattgagacagggtcttatgtgagaagtctaggatggactcaaactagtgagt 384
Query: 185 atatagacaaaatttattattattatttattaatttaaaagttggggggtgctatgtgtg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atatagacaaaatttattattattatttattaatttaaaagttggggggtgctatgtgtg 444
Query: 245 tgcatgtgcgtgttctgcttggttttttcctcttcctttggttctctccttctattttgc 304
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 445 tgcatgtgcgtgttctgcttggttctttcctcttcctttggttctctccttctattttgc 504
Query: 305 tttaaggcagggtctctcttgttgtgttactatgttgtgttttgctaattttcacgtggg 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tttaaggcagggtctctcttgttgtgttactatgttgtgttttgctaattttcacgtgga 564
Query: 365 ttccagggattaaactcaggttgacaggcttgcacaggaagcattttgacttgttggacc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttccagggattaaactcaggttgacaggcttgcacaggaagcattttgacttgttggacc 624
Query: 425 agctcctatttacagaccctggcttttctcttcttttcttttcttttcttttcttttctt 484
||||||||||||||||||||||||||||| |||||| |||| |||| ||||| |||| ||
Sbjct: 625 agctcctatttacagaccctggcttttcttttcttt-cttt-cttt-ctttt-tttt-tt 679
Query: 485 ttcttttcttttctttt 501
|| |||| |||| ||||
Sbjct: 680 tt-tttt-tttt-tttt 693
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_j20.g1 MSMg01no324_j20.g1 CHROMAT_FILE:
MSMg01no324_j20.g1 PHD_FILE: MSMg01no324_j20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:58 2005
(638 letters)
>mm_chr12_77786805_77787842
Length = 1038
Score = 1218 bits (630), Expect = 0.0
Identities = 636/638 (99%)
Strand = Plus / Minus
Query: 1 tcactatgtaatccaggctattccaagttcaagatggtcctgctgctctctgcttccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 tcactatgtaatccaggctattccaagttcaagatggtcctgctgctctctgcttccaca 798
Query: 61 gtactggaattacaggtgtgagccaccacacccagcactaatttgtaatacagagagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 gtactggaattacaggtgtgagccaccacacccagcactaatttgtaatacagagagaga 738
Query: 121 tcggtttttcctttcagacccagtggctcccagaggctgagttagcttttttggtgtttg 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 737 tcggtttttcctttcagacccagtggctcccagagtctgagttagcttttttggtgtttg 678
Query: 181 tttccttgcgtctcctctacagtccaacagttgttagaagatgttctttgtgacttaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tttccttgcgtctcctctacagtccaacagttgttagaagatgttctttgtgacttaatt 618
Query: 241 gtgggcactaatgtgcaccccagatcttgtaagccaagactttgccctgtctctccaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gtgggcactaatgtgcaccccagatcttgtaagccaagactttgccctgtctctccaggg 558
Query: 301 tttctcatagattactatggcatcgtttgtgtatgctggttgcttgcaaggatcacgctg 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tttctcataaattactatggcatcgtttgtgtatgctggttgcttgcaaggatcacgctg 498
Query: 361 catgctggggttttgtgctggttgacctggagtttcttggttggaggtccagtatttgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 catgctggggttttgtgctggttgacctggagtttcttggttggaggtccagtatttgtt 438
Query: 421 tactggcttcacaaatgaagaactctgttccctacacacagtggtcaacatgtcaacagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tactggcttcacaaatgaagaactctgttccctacacacagtggtcaacatgtcaacagc 378
Query: 481 agctgcagcttgcatgtcatgttttggtcagtgactcctgagagtagctctgcactactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agctgcagcttgcatgtcatgttttggtcagtgactcctgagagtagctctgcactactt 318
Query: 541 aaagctgagttacccctgctctgtatgtgtatgcatgagtgtgtggcatgtgtatgcatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aaagctgagttacccctgctctgtatgtgtatgcatgagtgtgtggcatgtgtatgcatg 258
Query: 601 tatgtgtgatgtgtgtgcatgtgtatgagtgtgtgtgc 638
||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tatgtgtgatgtgtgtgcatgtgtatgagtgtgtgtgc 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
