Query= MSMg01no325_l07.b1 MSMg01no325_l07.b1 CHROMAT_FILE:
MSMg01no325_l07.b1 PHD_FILE: MSMg01no325_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:15 2005
(611 letters)
>mm_chr12_25585191_25586200
Length = 1010
Score = 1152 bits (596), Expect = 0.0
Identities = 605/608 (99%), Gaps = 1/608 (0%)
Strand = Plus / Plus
Query: 4 ggaattccagtcacacccccctgcatccaatacagttatccatcaaaaagagcgcatggg 63
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccagtcacagcccc-tgcatccaatacagttatccatcaaaaagagcgcatggg 262
Query: 64 ataaggagattccaagacaatcatctgacccacaagaagttctaaagaaagtccttcagc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ataaggagattccaagacaatcatctgacccacaagaagttctaaagaaagtccttcagc 322
Query: 124 atgaaagagaatgtagtgagctgcgtctgcaggatggcgtgaggagacccaggaaaggca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atgaaagagaatgtagtgagctgcgtctgcaggatggcgtgaggagacccaggaaaggca 382
Query: 184 aatggatgtaactaggtctgggtgagagacaccatgcaggcactctcttccctcaacttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aatggatgtaactaggtctgggtgagagacaccatgcaggcactctcttccctcaacttg 442
Query: 244 gttgaaggacataggctgtgttcttaggattgtaatatccggtacagacggcagtactag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gttgaaggacataggctgtgttcttaggattgtaatatccggtacagacggcagtactag 502
Query: 304 tataaaggaacagggtgggggccatattggttacaaactttgttttctcagaattcactc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tataaaggaacagggtgggggccatattggttacaaactttgttttctcagaattcactc 562
Query: 364 agtcttaatgcaaaatacattatgaagaaagaaccatgcactgtcctatccagttaaata 423
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agtcttaatgtaaaatacattatgaagaaagaaccatgcactgtcctatccagttaaata 622
Query: 424 ggtaaggaaaaggtatatcagaaaaatctcaaatgcgggaaaccaggcctgtggtgtaat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ggtaaggaaaaggtatatcagaaaaatctcaaatgcgggaaaccaggcctgtggtgtaat 682
Query: 484 tctagcactggggaaactggggcaggagggtggttagtttgaggctagtaaatttgagac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tctagcactggggaaactggggcaggagggtggttagtttgaggctagtaaatttgagac 742
Query: 544 catcttggctatatagtaagaccctgtctcaccaaatacatccatccatacgtgcccgcg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 catcttggctatatagtaagaccctgtctcaccaaatacatccatccatacgtgcccgcg 802
Query: 604 cgcgttca 611
||||||||
Sbjct: 803 cgcgttca 810
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1010
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1000
Effective search space: 601000
Effective search space used: 601000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_l07.g1 MSMg01no325_l07.g1 CHROMAT_FILE:
MSMg01no325_l07.g1 PHD_FILE: MSMg01no325_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:15 2005
(656 letters)
>mm_chr12_25740558_25741613
Length = 1056
Score = 1268 bits (656), Expect = 0.0
Identities = 656/656 (100%)
Strand = Plus / Minus
Query: 1 aaataagaaggggaaatacataataaacatcagcttaggaaacacatatgtatactaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 aaataagaaggggaaatacataataaacatcagcttaggaaacacatatgtatactaata 797
Query: 61 atgtaaaagttatcacaattctagggtcttaaaaaatcgacctaacagtttaacaaaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 atgtaaaagttatcacaattctagggtcttaaaaaatcgacctaacagtttaacaaaagc 737
Query: 121 tatgagttcatgaataattctgtaattagcttagaaatttttagcaacattaatttactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tatgagttcatgaataattctgtaattagcttagaaatttttagcaacattaatttactg 677
Query: 181 tttatatttaaaagaacaatttcaggttgtagaagtcatctgagcatttgtgtttagtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tttatatttaaaagaacaatttcaggttgtagaagtcatctgagcatttgtgtttagtaa 617
Query: 241 tttcaagttgttttatttaaggtaaaagcaccttctagaaagaattcctcttagaagaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tttcaagttgttttatttaaggtaaaagcaccttctagaaagaattcctcttagaagaga 557
Query: 301 taaagaagaaacaaagacagactgcaaaaacaaaacaaagtctttaaggtacaataaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 taaagaagaaacaaagacagactgcaaaaacaaaacaaagtctttaaggtacaataaagg 497
Query: 361 aacctgtctcaaattatttgacaaaattggaagttcctgtccaattttaattcagagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aacctgtctcaaattatttgacaaaattggaagttcctgtccaattttaattcagagaaa 437
Query: 421 gaaatgttcttaaaatggggggtggggggataacacagatttgcaatgaacctcaacaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gaaatgttcttaaaatggggggtggggggataacacagatttgcaatgaacctcaacaga 377
Query: 481 agctgtgggttcgctggaccccagggaaatcaggacgggagacttaagttcagtttctag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 agctgtgggttcgctggaccccagggaaatcaggacgggagacttaagttcagtttctag 317
Query: 541 tactgggctttaagggaccagctgctttagactgtagaaacgctaacaaatgaacaatta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tactgggctttaagggaccagctgctttagactgtagaaacgctaacaaatgaacaatta 257
Query: 601 aaagtacagattagaaaaaagaaacaggggaagaaagaagcagcgtcaagagagtt 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aaagtacagattagaaaaaagaaacaggggaagaaagaagcagcgtcaagagagtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
