Query= MSMg01no325_l11.b1 MSMg01no325_l11.b1 CHROMAT_FILE:
MSMg01no325_l11.b1 PHD_FILE: MSMg01no325_l11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:16 2005
(504 letters)
>mm_chr12_100378748_100379651
Length = 904
Score = 851 bits (440), Expect = 0.0
Identities = 488/510 (95%), Gaps = 10/510 (1%)
Strand = Plus / Plus
Query: 4 ggaattcctcatctcaagttccctcttcctagatgattacagtttaagttgacaaaatcc 63
||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctcaactgaagttcccttttcctagatgattacagtttaagttgacaaaatcc 263
Query: 64 aagcagttcatcccctcccacctccccccacgatggactgtcagcaggcccaggtttctg 123
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 264 aagcagttcatcccctcccacctccccccacgatggactgtcggcaggcccaggtttctg 323
Query: 124 caggtcgtgtggtcaaataacttcagttgctgttgtttccttaggctttctgagacaaaa 183
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 324 caggtcgtgtggtcaaataacttcagttgctgttgtttctttaggctttctgagacaaaa 383
Query: 184 acctcactctgcacctcaggcaggcctcaattttgtctcaccttctcgagcatatttctt 243
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 384 acctcactctgcaccccaggcaggcctcaattttgtctcaccttctcaagcatatttctt 443
Query: 244 ctgagatatacagccatgtaccgccatgcctggctctggctggctctcatcctccacggg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgagatatacagccatgtaccgccatgcctggctctggctggctctcatcctccacggg 503
Query: 304 gcacatttggaaggaattatttcagagttcacctcagcctgctcaatggccttgctgagt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcacatttggaaggaattatttcagagttcacctcagcctgctcaatggccttgctgagt 563
Query: 364 gtgtgtgtgtgtgtgtgtgtgtgtgagagagagagagagagagagagagag--------- 414
||||||||||||||||||| | | |||||||||||||||||||||||||||
Sbjct: 564 gtgtgtgtgtgtgtgtgtgagagagagagagagagagagagagagagagagagagagaga 623
Query: 415 -catgtggccttgctgaccattgtcaacattccaacttttggctcacttgttggttcatt 473
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gcatgtggctttgctgaccattgtcaacattccaacttttggctcacttgttggttcatt 683
Query: 474 tgctgccatggctccttggaaggcaaaatg 503
|||||||| |||||||||||||||||||||
Sbjct: 684 tgctgccacggctccttggaaggcaaaatg 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_l11.g1 MSMg01no325_l11.g1 CHROMAT_FILE:
MSMg01no325_l11.g1 PHD_FILE: MSMg01no325_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:16 2005
(578 letters)
>mm_chr12_100544970_100545947
Length = 978
Score = 770 bits (398), Expect = 0.0
Identities = 401/402 (99%)
Strand = Plus / Minus
Query: 177 gagcataggattccctcacagatggttgtgagccaccatgtggttgctgggaattgaact 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 gagcataggattccctcacagatggttgtgagccaccatgtggttgctgggaattgaact 919
Query: 237 caggacctctggaagagcagtcagtgctcttaaccactgagccatctctccagcccttga 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 caggacctctggaagagcagtcagtgctcttaaccactgagccatctctccagcccttga 859
Query: 297 aatagaatttatcctgaacatattatacatgccctttgtcattacttcttaaacagtaca 356
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 858 aatagaatttatcctgaacatattatacatgccctttatcattacttcttaaacagtaca 799
Query: 357 gtattgtaacagtttatatagcatctgcattgtgtttggtaacccagagattagctggtg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gtattgtaacagtttatatagcatctgcattgtgtttggtaacccagagattagctggtg 739
Query: 417 catgtgtgcatatactgtgctatcttgtgtaaagagttctaggcacctgtgggaattttt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 catgtgtgcatatactgtgctatcttgtgtaaagagttctaggcacctgtgggaattttt 679
Query: 477 gtgtccttgagagatctggggtgactgacattttacaaaggcttaggtctcccaggcccc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gtgtccttgagagatctggggtgactgacattttacaaaggcttaggtctcccaggcccc 619
Query: 537 ttttctcacactcttcttaaaacacacacacacacacacaca 578
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ttttctcacactcttcttaaaacacacacacacacacacaca 577
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space: 549824
Effective search space used: 549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
