Query= MSMg01no325_o17.b1 MSMg01no325_o17.b1 CHROMAT_FILE:
MSMg01no325_o17.b1 PHD_FILE: MSMg01no325_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:31 2005
(597 letters)
>mm_chr12_16318707_16319703
Length = 997
Score = 886 bits (458), Expect = 0.0
Identities = 461/462 (99%)
Strand = Plus / Minus
Query: 136 cttgatgggctttagttactgtggaaacctgcctctgggtgttcccatgagtgtgcatcc 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997 cttgatgggctttagttactgtggaaacctgcctctgggtgttcccatgagtgtgcatcc 938
Query: 196 aggaaggtatagctgaagaggggagcctttctctgaatgtgagtgcattttcatggtaac 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 aggaaggtatagctgaagaggggagcctttctctgaatgtgagtgcattttcatggtaac 878
Query: 256 ttaagcagtttttcaataagggggacatcatatcagagtcaatagcagtttatgtatgtg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 ttaagcagtttttcaataagggggacatcatatcagagtcaatagcagtttatgtatgtg 818
Query: 316 tgtgtgtgtgtgtgtgtgtgcttcatgtgtaaataatgtcttcatggttataaatgaact 375
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 817 tgtgtgtgtgtgtgtgtgtgcttcatgtgtaaataatgtcttcatggttataaatgaatt 758
Query: 376 caccctttggtggaactatgtgaaaaaacaataaaaaggagtttgggaagcttgtgaggg 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 caccctttggtggaactatgtgaaaaaacaataaaaaggagtttgggaagcttgtgaggg 698
Query: 436 ttctcttcaagtgacagggtaacaatcagctttggagggttctgaagagccagtgccagc 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 ttctcttcaagtgacagggtaacaatcagctttggagggttctgaagagccagtgccagc 638
Query: 496 tcaaggcatgggcacatttgcactgtcttcatgctgcgaggaacccaacctttccttata 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 tcaaggcatgggcacatttgcactgtcttcatgctgcgaggaacccaacctttccttata 578
Query: 556 tataaaaacgaaatgtcatgagtgtcaacggacagtgtgtcc 597
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tataaaaacgaaatgtcatgagtgtcaacggacagtgtgtcc 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_o17.g1 MSMg01no325_o17.g1 CHROMAT_FILE:
MSMg01no325_o17.g1 PHD_FILE: MSMg01no325_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:31 2005
(634 letters)
>mm_chr12_16117636_16118668
Length = 1033
Score = 1172 bits (606), Expect = 0.0
Identities = 627/634 (98%), Gaps = 1/634 (0%)
Strand = Plus / Plus
Query: 1 tccctgtcttttagtactgtaatgccttcaccacagaaggagatggcttcctataatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccctgtcttttagtactgtaatgccttcaccacagaaggagatggcttcctataatgta 260
Query: 61 tgtcgtcttcctcagagcagtgttccaaaatgtgggctgcctttgagtctacactgagag 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtcgtctccctcagagcagtgttccaaaatgtgggctgcctttgagtctacactgagag 320
Query: 121 tgagcttactccaccataagcaggaatggatggactctctgccaagatacactgcccatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagcttactccaccataagcaggaatggatggactctctgccaagatacactgcccatt 380
Query: 181 gctaggcaatcccccttctgaagaacagagactttcagataatttggacaaatttcttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctaggcaatcccccttctgaagaacagagactttcagataatttggacaaatttcttag 440
Query: 241 cagtccttcctcggagcccctgaggttacaatgggcagtgtggaaaagctaacatacagc 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagtccttccacggagcccctgaggttacaatgggcagtgtggaaaagctaacatacagc 500
Query: 301 ctcagaggcagccatttgtctgttaccccccctgactcctagaacacacaaaaatgaaag 360
||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 501 ctcagaggcagccatttgtctgttacccccc-tgactcctagaacacagaaaaatgaaag 559
Query: 361 acaagcccaggatgccctccttgctttctgtaagaaggttgaaatcccttttgtaacttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 560 acaagcccaggatgccctccttgctttctgtaagaaggttgaaatccctttggtaacttg 619
Query: 421 tttttcaacatgtcccataagtttccaaagacattcttcatacttggtaacactgaacca 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 620 tttttcaacatgtcccataagtttccaaagacattcttcatacttggtaacactgaacta 679
Query: 481 atatttttatactcgaataagtgaaatagttctgagagtatccaaaactcatagaccatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atatttttatactcgaataagtgaaatagttctgagagtatccaaaactcatagaccatt 739
Query: 541 ttccatcttaataaaaaaaaacctgagtccatacacttaggactataagagtgagacact 600
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 740 ttccatcttaataaaaaaaaacctgagtccatacacttaggactaaaagagtgagacact 799
Query: 601 agctttgatagatggatgtgtcagtttgccagaa 634
||||||||||||||||||||||||||||||||||
Sbjct: 800 agctttgatagatggatgtgtcagtttgccagaa 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1033
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1023
Effective search space: 638352
Effective search space used: 638352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
