Query= MSMg01no326_c20.b1 MSMg01no326_c20.b1 CHROMAT_FILE:
MSMg01no326_c20.b1 PHD_FILE: MSMg01no326_c20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:50 2005
(513 letters)
>mm_chr12_31859402_31860314
Length = 913
Score = 907 bits (469), Expect = 0.0
Identities = 502/513 (97%), Gaps = 1/513 (0%)
Strand = Plus / Plus
Query: 1 attagacctatggcctctcaatattcccacaggaataatgaatcagtataaaccctggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attagacctatggcctctcaatattcccacaggaataatgaatcagtataaaccctggag 260
Query: 61 catctgatccaacatccctcatgtcccacttcaccttcagtccctcacttgccctcacat 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 catctgatccaacatccctcatgccccacttcaccttcagtccctcacttgccctcacat 320
Query: 121 tttagtctgtccttccagtgctcgcctaaggatagacagtgtgaatggcacttgctatgc 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatagtctgtccttccagtgctcgcctaaggatagacagtgtgaatggcacttgctatgc 380
Query: 181 acactccagtgaagtttgcttggcaggccgagaagcaatgagtttcacggaaactcacct 240
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 acactccagtgaagtttccttggcaggccaagaagcaatgagtttcacggaaactcacct 440
Query: 241 cctgtatattttggcgttctcataacccctatactcataccctatccccacgttagtctg 300
|||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgga-actttggcgttctcataacccctatactcataccctatccccacgttagtctg 499
Query: 301 gtgtatggatccacgtgctctcctttagtattatcttattacaaccgccttttaagattg 360
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 500 gtgtatggatccacgtgctctcctttagtattatcttattataagtgccttttaagattg 559
Query: 361 aattctgacatagctacgtcttcgccagtgttccaatgtcctagaaaatgcttgaagctg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 560 aattctgacatagctacgtcttcgccagtgttccaatgtcctagaaaatgcttgaagccg 619
Query: 421 aggagcttggtagagatagtgaaactaattaggcattacaaaagaaccaagccagagcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aggagcttggtagagatagtgaaactaattaggcattacaaaagaaccaagccagagcag 679
Query: 481 ctcagggctggtctgcagagtgtttacttggga 513
|||||||||||||||||||||||||||||||||
Sbjct: 680 ctcagggctggtctgcagagtgtttacttggga 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_c20.g1 MSMg01no326_c20.g1 CHROMAT_FILE:
MSMg01no326_c20.g1 PHD_FILE: MSMg01no326_c20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:50 2005
(605 letters)
>mm_chr12_32034438_32035442
Length = 1005
Score = 1123 bits (581), Expect = 0.0
Identities = 598/605 (98%), Gaps = 5/605 (0%)
Strand = Plus / Minus
Query: 1 aaagttttgggattttaattagaatactaaactgatccttggcaataaaattaacaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 aaagttttgggattttaattagaatactaaactgatccttggcaataaaattaacaatgc 576
Query: 61 tttctgaagttttaataaaactgtaagccattaaatatatttttattagatttaatatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tttctgaagttttaataaaactgtaagccattaaatatatttttattagatttaatatga 516
Query: 121 aatggttcattgaatgttcataataataaggcagacctggcaaggtaagattgtgaaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aatggttcattgaatgttcataataataaggcagacctggcaaggtaagattgtgaaagt 456
Query: 181 ttaatattatggacaaaaaagggaaattggtaggatacctgtttgcggcagagaaagtcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ttaatattatggacaaaaaagggaaattggtaggatacctgtttgcggcagagaaagtcc 396
Query: 241 attagcattattgcttgatacttttgccccagttgtcatcgaccttttaaattacatgta 300
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 395 attagtattattgcttgatacatttgccccagttgtcatcgaccttttaaattacatgta 336
Query: 301 ttacttgtgcacatgcctgtgggcatgagcgtgcaacatagagcacatgaaaggatgcca 360
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 335 ttacttgtgcacatgcctgtgggcatgagcgtgcaacatag-g---atgaaaggatgcca 280
Query: 361 gaagacagcttctgggagtcaggtctctgccaccatatagttcccacggattaaacttgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gaagacagcttctgggagtcaggtctctgccaccatatagttcccacggattaaacttgg 220
Query: 421 gaagtcacccttggtggcaggagcctttagccagcgggctattttgccagcctgttttaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gaagtcacccttggtggcaggagcctttagccagcgggctattttgccagcctgttttaa 160
Query: 481 aaattatattttacttaacaggaaaatttcttttgtcttttttttttcctattctagaaa 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 159 aaattatattttacttaacaggaaaatttcttttgtctttttttttt-ctattctagaaa 101
Query: 541 ggccatttcaatcggatatctcatggcctacaaggagtttcttcagttcctttaagaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 ggccatttcaatcggatatctcatggcctacaaggagtttcttcagttcctttaagaact 41
Query: 601 tatgc 605
|||||
Sbjct: 40 tatgc 36
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
