Query= MSMg01no326_n21.b1 MSMg01no326_n21.b1 CHROMAT_FILE:
MSMg01no326_n21.b1 PHD_FILE: MSMg01no326_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:38 2005
(649 letters)
>mm_chr12_35149404_35150454
Length = 1051
Score = 1122 bits (580), Expect = 0.0
Identities = 631/650 (97%), Gaps = 8/650 (1%)
Strand = Plus / Minus
Query: 5 gaattccatactt--accaaccactcattaacattaacttcttaggctcacgctgattct 62
|||||||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 gaattccata--tagaacaaccactcattaacattaacttcttaggctcacgctgattct 809
Query: 63 gacaatattgtcctttgtgtcccttccaaagccagcactagccactctaccctctgcttt 122
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 gacaatattgtcctctgtgtcccttccaaagccagcactagccactctaccctctgcttt 749
Query: 123 ctttgtggactgtggtagcttcttgctttcctgggtataaccagcctcacaacattgcta 182
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 ctttgtggactgttgtagcttcttgctttcctgggtataaccagcctcacaacattgcta 689
Query: 183 tgcagtattccag--tgctccgtgtatttccccagcctaccacatcctcaacggaatgca 240
||||||||||||| |||||||||||||||||||||||||| | |||||| |||||||||
Sbjct: 688 tgcagtattccagaatgctccgtgtatttccccagcctaccgcgtcctcagcggaatgca 629
Query: 241 gctgaatgtttctgatctgcatttctaaactcaggacagtggttggcacatagtagtacc 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 628 gctgaatgtttctgatctgcatttctaaactcaggacagtggttggcacctagtagtacc 569
Query: 301 tgtgtcttagttgaaggagttaagtcacctttctgggggtatggtgagtatattggagag 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 568 tgtgtcttagttgaaggagttaagtcatctttctgggggtatggtgagtatattggagag 509
Query: 361 gaggcaattgcctgtgaaatattttgttgttttggaaattgtgggcatcagctcac-cga 419
|||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 508 gaggtaattggctgtgaaatattttgttgttttggaaattgtgggcatcagctcactc-a 450
Query: 420 tggcaccttagtgagtagagggcaagagccggttgagaagaggcagagggtgaactcaga 479
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tggcaccttagtgggtagagggcaagagccggttgagaagaggcagagggtgaactcaga 390
Query: 480 gcactgtggagtcacactccagggttagattttgcttagaccttatcttcgctccaggct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gcactgtggagtcacactccagggttagattttgcttagaccttatcttcgctccaggct 330
Query: 540 tcggaaagaggtgacccacccaaaaccctgaaagtcctttaggaggttctttgtcattct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tcggaaagaggtgacccacccaaaaccctgaaagtcctttaggaggttctttgtcattct 270
Query: 600 ttggtatactagtgactttgtagagatctaacttattggtaaaaagagca 649
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ttggtatactagtgactttgtagagatctaacttattggtaaaaagagca 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1051
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1041
Effective search space: 665199
Effective search space used: 665199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_n21.g1 MSMg01no326_n21.g1 CHROMAT_FILE:
MSMg01no326_n21.g1 PHD_FILE: MSMg01no326_n21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:38 2005
(382 letters)
>mm_chr12_34981669_34982450
Length = 782
Score = 731 bits (378), Expect = 0.0
Identities = 381/382 (99%)
Strand = Plus / Plus
Query: 1 atccttttaatgttttaaaatgatacttttttccctggatatcattgttatttcataaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atccttttaatgttttaaaatgatacttttttccctggatatcattgttatttcataaat 260
Query: 61 ataaaattacctagtctgtttggtaaggaaagctgacttcatctgcttgtcagcagaatg 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 ataaaattacctagtctgtttggtaaggaaagttgacttcatctgcttgtcagcagaatg 320
Query: 121 gagtgtccttgtcttttgtccagggttaattgcaacgtcaatacaaaaatggaaccagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagtgtccttgtcttttgtccagggttaattgcaacgtcaatacaaaaatggaaccagaa 380
Query: 181 taaaaacaggaaggagggaaggttacttaacataaggtctgcgatagttcctcttgattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaaacaggaaggagggaaggttacttaacataaggtctgcgatagttcctcttgattc 440
Query: 241 taacacatagcatctctgctctttaacttgctcactgagccctctgatgctgttaaaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taacacatagcatctctgctctttaacttgctcactgagccctctgatgctgttaaaaca 500
Query: 301 tttgggactgctgaccacagtcttgttccctttccctctctaagtttgatcaacaaggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttgggactgctgaccacagtcttgttccctttccctctctaagtttgatcaacaaggtt 560
Query: 361 cttcttaatgatgacagcaatg 382
||||||||||||||||||||||
Sbjct: 561 cttcttaatgatgacagcaatg 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
