Query= MSMg01no329_e08.b1 MSMg01no329_e08.b1 CHROMAT_FILE:
MSMg01no329_e08.b1 PHD_FILE: MSMg01no329_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:39 2005
(372 letters)
>mm_chr12_4321688_4322459
Length = 772
Score = 687 bits (355), Expect = 0.0
Identities = 361/363 (99%)
Strand = Plus / Minus
Query: 5 gaattcctagtctctaaagtagataggtttcaagtagctgatgtacatgtatttagagga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gaattcctagtctctaaagtagataggtttcaagtagctgatgtacatgtatttagagga 508
Query: 65 aaatggaaagcctttttatatttaattcagattccatccatttcagatatttttgttcct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aaatggaaagcctttttatatttaattcagattccatccatttcagatatttttgttcct 448
Query: 125 gttttttccatcatttctttgttcaactagctcttaagtaagaccaacttatgacacaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gttttttccatcatttctttgttcaactagctcttaagtaagaccaacttatgacacaga 388
Query: 185 tgacctgatcacacctgagtttttcttggagacactgcatgggaacaactctgagtagca 244
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 387 tgacctgatcacacctgagtttttcttggagacactgcatgggaacatctctgagtagca 328
Query: 245 cttagaagggtcctcagcaccattaatgtgggacctgaggcgagggcgcaggggactaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cttagaagggtcctcagcaccattaatgtgggacctgaggcgagggcgcaggggactaaa 268
Query: 305 agtaaggttcccttcgtgcttcttccttgcgcctgtgctctgggaactcttgttctgtca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 267 agtaaggttcccttcgtgcttcttccttgcgcctgtgctctgggaactcttgttctgcca 208
Query: 365 ccc 367
|||
Sbjct: 207 ccc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_e08.g1 MSMg01no329_e08.g1 CHROMAT_FILE:
MSMg01no329_e08.g1 PHD_FILE: MSMg01no329_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:40 2005
(340 letters)
>mm_chr12_4155012_4155749
Length = 738
Score = 621 bits (321), Expect = 0.0
Identities = 334/339 (98%), Gaps = 2/339 (0%)
Strand = Plus / Plus
Query: 1 tggtgagcacatgatgtctggaatagtgcaagatgtggaacaaacccccaaataaatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggtgagcacatgatgtctggaatagtgcaagatgtggaacaaacccccaaataaatatc 260
Query: 61 ctcatctgcagctaggcagggtgtgcatggtcgcaagaggcccttcttctgaccatacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcatctgcagctaggcagggtgtgcatggtcgcaagaggcccttcttctgaccatacca 320
Query: 121 ggatttctttaaatgcagagagaaggtgggggagttctcaaaaacacacccagacaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 321 ggatttctttaaatgcagagagaaggtgggggagttctcaaaaacacacacaggcaaaga 380
Query: 181 atttcctctttcctctgtgggcgcctccctgagctagccagccacttggtgctgaagttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttcctctttcctctgtgggcgcctccctgagctagccagccacttggtgctgaagttg 440
Query: 241 atgggaagatgggacaaatcccagtctttgctttctttccttcctcattcagtagtgagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 atgggaagatgggacaaatcccagtctttgctttctttccttcctcattcagtag--agc 498
Query: 301 aggaggtacagggggtgagtagaaagcgcctgtatcaga 339
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 499 aggaggtacaggaggtgagtagaaagcgcctgtatcaga 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 738
Length adjustment: 9
Effective length of query: 331
Effective length of database: 729
Effective search space: 241299
Effective search space used: 241299
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
