Query= MSMg01no329_e10.b1 MSMg01no329_e10.b1 CHROMAT_FILE:
MSMg01no329_e10.b1 PHD_FILE: MSMg01no329_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:40 2005
(299 letters)
>mm_chr12_105913126_105913825
Length = 700
Score = 538 bits (278), Expect = e-157
Identities = 293/298 (98%), Gaps = 1/298 (0%)
Strand = Plus / Plus
Query: 1 agcctgtagatgtgattagcaggtgaggattccaggggccaggaagtcaggtgctgtcag 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 agcctgtagatgtgattagcaggtgaggattctaggggccaggaagtcaggtgctgtcag 260
Query: 61 caccagaaaggccaagctggtgacccacgtgcagcagggagaccaggcagggcccccagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caccagaaaggccaagctggtgacccacgtgcagcagggagaccaggcagggcccccagc 320
Query: 121 aggggacgggatggacttcctgtctagagtcagacgtcagaggccctataagaggcctct 180
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 aggggacgggatggacttcctgtctagagtcagacgtcagaggccctaggagaggcctct 380
Query: 181 -gtgacttgtgactggaaaacccttttctctccacctgccctgtccctgtgcagtcattt 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgacttgtgactggaaaacccttttctctccacctgccctgtccctgtgcagtcattt 440
Query: 240 cccgttgtcttccctgtatcttcctggtcctttttagactctagaggatgaaggtgcg 297
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccgttgtcttccctgcatcttcctggtcctttttagactctagaggatgaaggtgcg 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 700
Length adjustment: 9
Effective length of query: 290
Effective length of database: 691
Effective search space: 200390
Effective search space used: 200390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_e10.g1 MSMg01no329_e10.g1 CHROMAT_FILE:
MSMg01no329_e10.g1 PHD_FILE: MSMg01no329_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:40 2005
(302 letters)
>mm_chr12_106073683_106074384
Length = 702
Score = 530 bits (274), Expect = e-155
Identities = 295/302 (97%)
Strand = Plus / Minus
Query: 1 ccagaggcctgtgtggggcgggaggcaggggtgggctgttgctatggagaactctgatga 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ccagaggcctgtgtgggacgggaggcaggggtgggctgttgctatggagaactctgatga 443
Query: 61 tactcagtctatagctcattaaagcagtgtgttcttctcaaagctggagaatatcactgg 120
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 442 cactcagtctatagctctttaaagcagcgtgttcttctcaaagctggagaatatcactgg 383
Query: 121 gatgcacgcacacgcacacgcacaggcacaggctcaggcacatgcacacgcacatatacc 180
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 382 gatgcacgcacacgcacacgcacacgcacaggctcaggcacacgcacacgcacatatacc 323
Query: 181 cctgccccgccttcaagctggctgaaggtaaatgttaaacagagctctgtctgggcatga 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cctaccccgccttcaagctggctgaaggtaaatgttaaacagagctctgtctgggcatga 263
Query: 241 ggagagtggcttgctgcatctcatttcagccagccgcaggaatatgattcatcaggaagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggagagtggcttgctgcatctcatttcagccagccgcaggaatatgattcatcaggaagc 203
Query: 301 aa 302
||
Sbjct: 202 aa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space: 203049
Effective search space used: 203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
