Query= MSMg01no329_f21.b1 MSMg01no329_f21.b1 CHROMAT_FILE:
MSMg01no329_f21.b1 PHD_FILE: MSMg01no329_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:47 2005
(481 letters)
>mm_chr12_96313795_96314676
Length = 882
Score = 897 bits (464), Expect = 0.0
Identities = 473/476 (99%), Gaps = 1/476 (0%)
Strand = Plus / Plus
Query: 7 gaattcattgaactttttatgaattaccaaatgtttttttttttttt-catcagatatgt 65
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 207 gaattcattgaactttttatgaattaccaaatgtttttttttttttttcatcagatatgt 266
Query: 66 agctagagtttctgcatttctgggaccgaggaagtaatactaatagtgttgcctgaagaa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 agctagagtttctgcatttctgggaccgaggaagtaatactaatagtgttgcctgaagaa 326
Query: 126 tcaggatacatctataaattggaaaacgttgattgtgaaaaataaaaaaaatatggcaat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tcaggatacatctataaattggaaaacgttgattgtgaaaaataaaaaaaatatggcaat 386
Query: 186 atattaggtgtagctcttatcagacacactaattatacatctgtgttccacatgaacaca 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atattaggtgtagctcttatcagacacactaattatacatctgtgttccacatgaacaca 446
Query: 246 aatacacattccagtgacttagtagttgaacttaaatgttgtggattatacttaaattta 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aatacacattccagtgacttagtagttgaacttaaatgttgtggattatacttaaattta 506
Query: 306 ttcttgtaataatgttgccttcattaaaatataaagtaggaacataaaatagtaggctat 365
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 507 ttcttgtaataatgttgccttcattaaaatataaagtaggaacacaaaatagtaggctat 566
Query: 366 acacaactttatcctcaagaaagaatacattagtgcaagtgtgtttgtgtatgagtgtgt 425
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 acacaaccttatcctcaagaaagaatacattagtgcaagtgtgtttgtgtatgagtgtgt 626
Query: 426 gcattcgtgtgcatccgttgatttttaaatttcctgtggttgttcacaaaatgaag 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gcattcgtgtgcatccgttgatttttaaatttcctgtggttgttcacaaaatgaag 682
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 882
Length adjustment: 10
Effective length of query: 471
Effective length of database: 872
Effective search space: 410712
Effective search space used: 410712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_f21.g1 MSMg01no329_f21.g1 CHROMAT_FILE:
MSMg01no329_f21.g1 PHD_FILE: MSMg01no329_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:47 2005
(340 letters)
>mm_chr12_96418872_96419611
Length = 740
Score = 642 bits (332), Expect = 0.0
Identities = 338/340 (99%)
Strand = Plus / Minus
Query: 1 actgttggtgctggctgctttctgtttttcctgtctgagatacaagtagggttgaaagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 actgttggtgctggctgctttctgtttttcctgtctgagatacaagtagggttgaaagca 481
Query: 61 gaagtattgatggggaagagctatcaccattctcagcctcatagggactgttggtgtaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 480 gaagtattgatggggaagagctatcaccattctcagcctcatagggactgttggtgttag 421
Query: 121 tacacacaaataacaaaagcctctgcgtgaatgatggattaattattttttttttttggt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cacacacaaataacaaaagcctctgcgtgaatgatggattaattattttttttttttggt 361
Query: 181 ctaatggcctcttattcatgttttttatgccctcgtttgttaacactactcgacacttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctaatggcctcttattcatgttttttatgccctcgtttgttaacactactcgacacttct 301
Query: 241 cttcatttttaatgagtccttggaaaatggacacagtactcatcctaattgttagtactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cttcatttttaatgagtccttggaaaatggacacagtactcatcctaattgttagtactg 241
Query: 301 gaggattcattcacattttgttagccagaacaacatacaa 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gaggattcattcacattttgttagccagaacaacatacaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
