Query= MSMg01no329_n12.b1 MSMg01no329_n12.b1 CHROMAT_FILE:
MSMg01no329_n12.b1 PHD_FILE: MSMg01no329_n12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:26 2005
(230 letters)
>mm_chr12_103847707_103848336
Length = 630
Score = 354 bits (183), Expect = e-102
Identities = 210/219 (95%), Gaps = 2/219 (0%)
Strand = Plus / Minus
Query: 13 gaattccctcttcccca-tatgtctaactttgtgtcaggttgaccaaagctaactaaaac 71
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gaattccctcttcccaagtatgtctaactttgtgtcaggttgaccaaagctaactaaaac 371
Query: 72 acacaggcaaggtctgaatttggagcttttggtgggagagcaaaacccacttccctgtca 131
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 370 acacaggcaaggtctgaatttggagcttttggtgagagagcaaaacccacttccctgcca 311
Query: 132 ggggaccgcagagatgtattatagccagtgtgccccgtcttctcattagtctcggattgc 191
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 310 ggggaccgcagagatgtagtatagccagtgtgccc-gtcttctcattagtctcggattgc 252
Query: 192 agtgttgaactgtccacccccaccccatagtgcgtgtgt 230
|||| |||||||||||||||||||||||||| ||||||
Sbjct: 251 agtggggaactgtccacccccaccccatagtgtgtgtgt 213
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 630
Length adjustment: 9
Effective length of query: 221
Effective length of database: 621
Effective search space: 137241
Effective search space used: 137241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no329_n12.g1 MSMg01no329_n12.g1 CHROMAT_FILE:
MSMg01no329_n12.g1 PHD_FILE: MSMg01no329_n12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:27 2005
(199 letters)
>mm_chr12_103677685_103678283
Length = 599
Score = 369 bits (191), Expect = e-107
Identities = 197/199 (98%)
Strand = Plus / Plus
Query: 1 cgggcgtcgcgcagactcagagcagccacctctagagtccgccccgctgtgattgagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cgggcgtcgcgcagactcagagcagccacctctagagtccgccccgctgtgattgagctg 260
Query: 61 cggcaacacggatcgctgagcccgggctacttgcgcagcctgatttgtgcagcctcggag 120
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 cggcaacacagatcgctgagcccgggctacctgcgcagcctgatttgtgcagcctcggag 320
Query: 121 tgtggcgtataaggaaaccaatagaagctgagactgaggccggcaagccagaaagactac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtggcgtataaggaaaccaatagaagctgagactgaggccggcaagccagaaagactac 380
Query: 181 gaatcccagtgtgcgtggg 199
|||||||||||||||||||
Sbjct: 381 gaatcccagtgtgcgtggg 399
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 599
Length adjustment: 8
Effective length of query: 191
Effective length of database: 591
Effective search space: 112881
Effective search space used: 112881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
