TCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCATATGTACACTGCTCATATAGTCATACAGTCACATCTTCATAAAT
ACTGGAATCACTGCAGGAATTCCATATGTACAATGCTCACTGCAATCCAA
AGACTCCTTTTTCTGCTATTTTGTCACACGTAAGCTTAAGAAAAGCAGAG
TGATTCAAGTTGCTGAGGGCTTTAAGGCTGTATCTTGGGTATGCAGAGTT
GAATTTACCTGAAGGCCATTCACTGGTCACAAGCTTTGCCTATGACAAAC
TATTCCTTGGGACTACTGTTACCTTTTTAGGAGCAGAGAAGTTTTTTGTT
AAACTTACCTCTTGGAATGGACTTTTGTTCCTAGGAACTGAGCTGCAATA
AAGAGAAACTGCACTGAAAATTTCATCCTTGGCTTCTTTTACGGGTAAGA
TGGGTATGGGGACACACGTTCATGTGCACTTGTGAGCAGCATTAAGAAGG
TATTCCAGGTCCACCTTCCTGGGAAGCAGGGGGTTCTTCAGTTTTGTAGA
GGAAGGAGCTAGAAGGTAGATATCTCAATGTCTAAAAGGGAAGGGGACAA
CCTACTAACAACTGACACAAACTCTAGATAGCCTCCGTGAGAAAGTGAGG
AAGATGGGAACGGGTGCAACCTTGCCACACGCAAACACAACACCTCCATT
TGCATCCTCTTCAGGGTGGGAAGGGGAAATGAA

NCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATAAAATTGGGATTATTTGCTTTT
AGAATAGATTTATATAGAGATTTGTGTCCGAATCACATGGAGAATTTCAC
CTGTGGTTCAGAACTAGGATAGAGAAAGTTAGTCAAAGTCCATGTAGAGA
GAGCAGTGGTAATTACTTGCTATGACCAGGTATTAATTTTTAATGTCTGT
GGCTCCAACTAGAGAGCCCAACAGATAAATGGTATAACAGGATGGCTGCT
CTAGGCACAGAGTTTAACAAGTAAAAACTACCTGCTTCTTATAGGCAGGT
GCTGCCTGTATTTTTATTAGTAAAAGTTTGTATTGTTTTAAAGATGGCAT
AAAGATATATTGCTCTAATATGCCACAGGATACTCAAATTCTGTCTAACG
TGGGCTACACTGGAATTTGGGTTATTATCTTGCATGGCAAAATAGAAAAG
GTCTAAGAATAGCACATACAGTATTTTAGTTTATTTCATTTATTTTGGGT
TATATTAATTTTCAAAGTGGGTGTGATGTTGAGTTTTATGGTTATATTAT
TCCTCTGAGAGAGAGGTCAATATAAAGGATTTTCTGGTTACTGGCTCAAG
GATATGCCGATTTGGGAGAAGCGTTTTGTCTTTGTGGTTTTAGAAAAAGT
AATTAGTGTCTGTATGCCTTCCAGAGTGACATAGATC

Query= MSMg01no329_o04.b1 MSMg01no329_o04.b1 CHROMAT_FILE:
MSMg01no329_o04.b1 PHD_FILE: MSMg01no329_o04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:30 2005
         (611 letters)



>mm_chr12_52545505_52546515
          Length = 1011

 Score = 1160 bits (600), Expect = 0.0
 Identities = 606/608 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattccatatgtacactgctcatatagtcatacagtcacatcttcataaatactggaa 63
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 ggaattccatatgtacagtgctcatatagtcatacagtcacatcttcataaatactggaa 752

                                                                       
Query: 64  tcactgcaggaattccatatgtacaatgctcactgcaatccaaagactcctttttctgct 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 tcactgcaggaattccatatgtacaatgctcactgcaatccaaagactcctttttctgct 692

                                                                       
Query: 124 attttgtcacacgtaagcttaagaaaagcagagtgattcaagttgctgagggctttaagg 183
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 attttgtcacgcgtaagcttaagaaaagcagagtgattcaagttgctgagggctttaagg 632

                                                                       
Query: 184 ctgtatcttgggtatgcagagttgaatttacctgaaggccattcactggtcacaagcttt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ctgtatcttgggtatgcagagttgaatttacctgaaggccattcactggtcacaagcttt 572

                                                                       
Query: 244 gcctatgacaaactattccttgggactactgttacctttttaggagcagagaagtttttt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gcctatgacaaactattccttgggactactgttacctttttaggagcagagaagtttttt 512

                                                                       
Query: 304 gttaaacttacctcttggaatggacttttgttcctaggaactgagctgcaataaagagaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gttaaacttacctcttggaatggacttttgttcctaggaactgagctgcaataaagagaa 452

                                                                       
Query: 364 actgcactgaaaatttcatccttggcttcttttacgggtaagatgggtatggggacacac 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 actgcactgaaaatttcatccttggcttcttttacgggtaagatgggtatggggacacac 392

                                                                       
Query: 424 gttcatgtgcacttgtgagcagcattaagaaggtattccaggtccaccttcctgggaagc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gttcatgtgcacttgtgagcagcattaagaaggtattccaggtccaccttcctgggaagc 332

                                                                       
Query: 484 agggggttcttcagttttgtagaggaaggagctagaaggtagatatctcaatgtctaaaa 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 agggggttcttcagttttgtagaggaaggagctagaaggtagatatctcaatgtctaaaa 272

                                                                       
Query: 544 gggaaggggacaacctactaacaactgacacaaactctagatagcctccgtgagaaagtg 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gggaaggggacaacctactaacaactgacacaaactctagatagcctccgtgagaaagtg 212

                   
Query: 604 aggaagat 611
           ||||||||
Sbjct: 211 aggaagat 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space:   601601
Effective search space used:   601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no329_o04.g1 MSMg01no329_o04.g1 CHROMAT_FILE:
MSMg01no329_o04.g1 PHD_FILE: MSMg01no329_o04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:30 2005
         (618 letters)



>mm_chr12_52364961_52365978
          Length = 1018

 Score = 1133 bits (586), Expect = 0.0
 Identities = 610/618 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ataaaattgggattatttgcttttagaatagatttatatagagatttgtgtccgaatcac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataaaattgggattatttgcttttagaatagatttatatagagatttgtgtccgaatcac 260

                                                                       
Query: 61  atggagaatttcacctgtggttcagaactaggatagagaaagttagtcaaagtccatgta 120
           |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||
Sbjct: 261 atggagaatttcacctgtggttcagaactaggatagggaaagttagtcagagtccaagta 320

                                                                       
Query: 121 gagagagcagtggtaattacttgctatgaccaggtattaatttttaatgtctgtggctcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 321 gagagagcagtggtaattacttgctatgaccaggtattaatttttaatgtctgtggctct 380

                                                                       
Query: 181 aactagagagcccaacagataaatggtataacaggatggctgctctaggcacagagttta 240
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtagagagcccaacagataaatggtataacaggatggctgctctaggcacagagttta 440

                                                                       
Query: 241 acaagtaaaaactacctgcttcttataggcaggtgctgcctgtatttttattagtaaaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaagtaaaaactacctgcttcttataggcaggtgctgcctgtatttttattagtaaaag 500

                                                                       
Query: 301 tttgtattgttttaaagatggcataaagatatattgctctaatatgccacaggatactca 360
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 tttgtattgttttaaagatggcataaagatatgttgctctaatatgccacaggatactca 560

                                                                       
Query: 361 aattctgtctaacgtgggctacactggaatttgggttattatcttgcatggcaaaataga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aattctgtctaacgtgggctacactggaatttgggttattatcttgcatggcaaaataga 620

                                                                       
Query: 421 aaaggtctaagaatagcacatacagtattttagtttatttcatttattttgggttatatt 480
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaggcctaagaatagcacatacagtattttagtttatttcatttattttgggttatatt 680

                                                                       
Query: 481 aattttcaaagtgggtgtgatgttgagttttatggttatattattcctctgagagagagg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aattttcaaagtgggtgtgatgttgagttttatggttatattattcctctgagagagagg 740

                                                                       
Query: 541 tcaatataaaggattttctggttactggctcaaggatatgccgatttgggagaagcgttt 600
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 741 tcaatataaaggattttctggttactagctcaaggatatgccgatttgggagaagcgttt 800

                             
Query: 601 tgtctttgtggttttaga 618
           ||||||||||||||||||
Sbjct: 801 tgtctttgtggttttaga 818


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space:   612864
Effective search space used:   612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)