Query= MSMg01no330_d24.b1 MSMg01no330_d24.b1 CHROMAT_FILE:
MSMg01no330_d24.b1 PHD_FILE: MSMg01no330_d24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:55 2005
(239 letters)
>mm_chr12_65559273_65559911
Length = 639
Score = 456 bits (236), Expect = e-133
Identities = 236/236 (100%)
Strand = Plus / Plus
Query: 1 tatacagagacatcaaagtcttgtggctcttttttggggggaggaatattgtaaaaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatacagagacatcaaagtcttgtggctcttttttggggggaggaatattgtaaaaatat 260
Query: 61 ctaaacgtttacctctagcttgagtagagctatatgtaaaagaattcgatgcaacatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaaacgtttacctctagcttgagtagagctatatgtaaaagaattcgatgcaacatttt 320
Query: 121 ctgagcaatcacaaacttaacagtacctttgaaatatcctatcttcttacagtaaagctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgagcaatcacaaacttaacagtacctttgaaatatcctatcttcttacagtaaagctt 380
Query: 181 ttcatagtgatgtttaccattaactacattgacaaagttgctgaaagtgagtaata 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcatagtgatgtttaccattaactacattgacaaagttgctgaaagtgagtaata 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no330_d24.g1 MSMg01no330_d24.g1 CHROMAT_FILE:
MSMg01no330_d24.g1 PHD_FILE: MSMg01no330_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:55 2005
(295 letters)
>mm_chr12_65719395_65720089
Length = 695
Score = 524 bits (271), Expect = e-153
Identities = 286/293 (97%), Gaps = 4/293 (1%)
Strand = Plus / Minus
Query: 1 acttcagccattaataacagcaaacctagagaggtgaggggctggtactatttagtaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 acttcagccattaataacagcaaacctagagaggtgaggggctggtactatttagtaagg 338
Query: 61 gtcttaggtgtttagtaagaggcagtagtttgatggtgttctaaaactgaggttttagtc 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 337 gtcttaggtgttgagtaagaggcagtagtttgatggtgttctaaaactgaggttttaatc 278
Query: 121 tagtaaggtgagggttcttgttgttaattgagaccttgagccacttttcctttgataaaa 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tagtaaggtaagggttcttgttgttaattgagaccttgagccacttttcctttgataaaa 218
Query: 181 gaaacagaagaaatagatgtttgtttgtttgcttgtttgtttttcaggactcataggtaa 240
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 217 gaaacagaagaaatagatgtttgtttgtttg----tttgtttttcaggactcataggtaa 162
Query: 241 tatctgggtcacttcagtcacagtggtgggactaagattgtctttgatgtcta 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 tatctgggtcacttcagtcacagtggtgggactaagattgtctttgatgtcta 109
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
