TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATCAGTCTGTGCTTTTCCAAAGCTGGTATTCTGCAAGCACCACCAC
GTCTGACTTTTACTGCTTTCTGACCATCTTACCTCAGAACCTCACAATTA
TATAAGGCTACACACTCCCCATTCTAATTATTTATTTTTAGAGTGATTTA
TTAATTATTTAAAATTAACAGCCATTAATTATGATTACTTATACATATTG
GTTAAATTTATTGGTCTCATTAGGCTTAACGTAATTGTGATGCGAATCTC
ACAGCTTTCAGTGTTGCCAAATAACTTTGGTGTGTTATGTGGATAGCTGC
TGTGTTCCTCTTATTTTCAGTACCCGCATAGCATACTGAGCCAGCTGTGA
TTTAGAAATCTGGAGCCTGGAAAGCTAAGAAGAGAAGCATGAAATAGGAA
GAGTGAATGGGCAGGGGGCAATTTCCTGCATAGGAAACCACAATAAAAGA
TACTCATCTTGTCTAATAGAATTGCCAATTCCAGGCCATAGGCTGCATGA
TTTACAATGAACAGGAATGTGTCTGCTCACAGTGGTGAAGGCTAGGAAGT
CCAGTGTCAAGGAGCAGCCATGTGATAAGGGCTCTGTAGTCTGGAGGGCT
CTAATGTGCCTGGGGGAAAGGCTGCATGGAGATTCTATTGCAGTGCAATA
CGATTTATTTTTATGGAACATACGTTTGTN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTACATAAGCATCTTACACAGAAAG
TTAGTGGAAAATTTTAGAGTCTTTTCCCATTCGAACGATGACTGTCTGTT
ATGATCCAGGGTTCACATTGGCCCTGAGGAATCCATGATGCTTAGAAGAT
GTAAGCTGCTGATGAAGCAGGTGAATATTCATTCCCCCTCTTTCAGGGTC
TGATTTGCTGTCATAGAAGTAGAAACGAAAATTTAAAAATAATCAGATTG
GTGGTTTTTTTTAAAGGTAGTTCTTTGTAAACAAACAAACAAAATAGATT
TCTGCAATGCCCTGTGTATTTTTATGCACACACCACAGAAAACAAAACCT
ATCTGTTCTTTTCATGAAGGCTTGAAAGATTTAAGGGACATTCAGTAGTA
TAGTAACCAACACAGTCAACTAATCTGGACCCTTGGGAGCTCTCAGAGAA
GGAACCACCAACTAGAGAACATACACAGGCTGGACCTATGCCCCCGTTCA
CATATGTTGCAGATGTGCAGCTTGGTCTTCATGTTGATTTCAAACAACTA
GACTTGTGGCTATCTCANAAGCTGTTGCCTGTCCTGAGATATGTCTTCTA
GCTGGGCTGCCTTGTCTGGCCTCATTGGTAGAGGACGCATCTAGCCTCAT
AGAGACTTGATGTGCCAGGGTTGGGTAGTGAGCAGAA

Query= MSMg01no330_k08.b1 MSMg01no330_k08.b1 CHROMAT_FILE:
MSMg01no330_k08.b1 PHD_FILE: MSMg01no330_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:24 2005
         (321 letters)



>mm_chr12_68274752_68275472
          Length = 721

 Score =  565 bits (292), Expect = e-165
 Identities = 310/316 (98%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcatcagtctgtgcttttccaaagctggtattctgcaagcaccaccacgtctgac 63
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 690 ggaattcatcagtctgtgcttttccagagctggtattctgcaagcaccaccacgtctgac 631

                                                                       
Query: 64  ttttactgctttctgaccatcttacctcagaacctcacaattatataaggctacacactc 123
           ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ttttactgctttctgagtatcttacctcagaacctcacaattatataaggctacacactc 571

                                                                       
Query: 124 cccattctaattatttatttttagagtgatttattaattatttaaaattaacagccatta 183
           |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 570 cccactctaattatttatttttaaagtgatttattaattatttaaaattaacagccatta 511

                                                                       
Query: 184 attatgattacttatacatattggttaaatttattggtctcattaggcttaacgtaattg 243
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 510 attatgattacttatacatattagttaaatttattggtctcattaggcttaacgtaattg 451

                                                                       
Query: 244 tgatgcgaatctcacagctttcagtgttgccaaataactttggtgtgttatgtggatagc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tgatgcgaatctcacagctttcagtgttgccaaataactttggtgtgttatgtggatagc 391

                           
Query: 304 tgctgtgttcctctta 319
           ||||||||||||||||
Sbjct: 390 tgctgtgttcctctta 375


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space:   222144
Effective search space used:   222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no330_k08.g1 MSMg01no330_k08.g1 CHROMAT_FILE:
MSMg01no330_k08.g1 PHD_FILE: MSMg01no330_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:24 2005
         (239 letters)



>mm_chr12_68116902_68117540
          Length = 639

 Score =  427 bits (221), Expect = e-124
 Identities = 233/237 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcgaacgatgactgtctgttatgatccagggttcacattggccctgaggaatccatgat 60
           |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 201 ttcgaacgatgactgtctgttatgatccagggttcacactggccctgaggaatccatggt 260

                                                                       
Query: 61  gcttagaagatgtaagctgctgatgaagcaggtgaatattcattccccctctttcagggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcttagaagatgtaagctgctgatgaagcaggtgaatattcattccccctctttcagggt 320

                                                                       
Query: 121 ctgatttgctgtcatagaagtagaaacgaaaatttaaaaataatcagattggtggttttt 180
           |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 321 ctgatttgctgtcatagaagtagaaatgaaaatttaaaaataatcagattggtggtttct 380

                                                                    
Query: 181 tttaaaggtagttctttgtaaacaaacaaacaaaatagatttctgcaatgccctgtg 237
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaaaggtagttctttgtaaacaaacaaacaaaatagatttctgcaatgccctgtg 437


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space:   144900
Effective search space used:   144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)