Query= MSMg01no333_b01.b1 MSMg01no333_b01.b1 CHROMAT_FILE:
MSMg01no333_b01.b1 PHD_FILE: MSMg01no333_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:09 2005
(368 letters)
>mm_chr12_82868902_82869669
Length = 768
Score = 625 bits (323), Expect = 0.0
Identities = 354/365 (96%), Gaps = 6/365 (1%)
Strand = Plus / Plus
Query: 4 ggaattctgcttt-ttctgaatagttttttttttttc-agacacagtttctctgtgtagc 61
||||||||||||| || || ||| || ||||||||| ||||||||||||||||||||||
Sbjct: 206 ggaattctgctttgtt-tg-ata--ttgttttttttcaagacacagtttctctgtgtagc 261
Query: 62 cttggctgtcctggaactctctctagtaaactaggctggccttgaactcagagatccact 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cttggctgtcctggaactctctctagtaaactaggctggccttgaactcagagatccact 321
Query: 122 tgcttctgccccccaagtgctgggattaaaggcatgtgccaccatcaccaggcatttagt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tgcttctgccccccaagtgctgggattaaaggcatgtgccaccatcaccaggcatttagt 381
Query: 182 ccccatcctcttacaggcaagtgtgaggccacactgaccctgtccagggtgcctgagcct 241
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 382 ccccatcctcttacaggcaagtgtgaggccacactgaacctgtccagggtgcctgagcct 441
Query: 242 tacctgctccatctacaggtacgaatgttacctatcagaaatataggaaaatgctggagt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tacctgctccatctacaggtacgaatgttacctatcagaaatataggaaaatgctggagt 501
Query: 302 caagtctagtggatcagccagcaaacgctcagccatacaaagtcctacacaaattcaggc 361
||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 502 caagtatagtggatcagccagcaaactctcagccatagaaagtcctacacaaattcaggc 561
Query: 362 agaga 366
|||||
Sbjct: 562 agaga 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no333_b01.g1 MSMg01no333_b01.g1 CHROMAT_FILE:
MSMg01no333_b01.g1 PHD_FILE: MSMg01no333_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:09 2005
(345 letters)
>mm_chr12_83031551_83032295
Length = 745
Score = 658 bits (340), Expect = 0.0
Identities = 343/344 (99%)
Strand = Plus / Minus
Query: 1 atctgaacacaaaatgacctcaaagatttctaaccacatgttctcaaaaatgactgtgac 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 507 atctgaacacaaaatgacctcatagatttctaaccacatgttctcaaaaatgactgtgac 448
Query: 61 ctcattttattacagaccttttcatctcatactttaagaaggtaaagatacctaaaatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ctcattttattacagaccttttcatctcatactttaagaaggtaaagatacctaaaatca 388
Query: 121 cttgctctttaccaaagtaagatgatttccttctatcccaatctaccaaggactcaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cttgctctttaccaaagtaagatgatttccttctatcccaatctaccaaggactcaaaaa 328
Query: 181 ctatgacttcgggtaataaatatcaaactctttatattataaggaattttaaatatttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctatgacttcgggtaataaatatcaaactctttatattataaggaattttaaatatttgt 268
Query: 241 ctttactttagctctagtcactaagaagaattaactagggcctgtataacctacctacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ctttactttagctctagtcactaagaagaattaactagggcctgtataacctacctacaa 208
Query: 301 agctaacttaattaaaaatttttaaataattcttaaggagctta 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 agctaacttaattaaaaatttttaaataattcttaaggagctta 164
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
