CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAAGACCGCGGAA
TTCAGCCAATTTCCCATTGGTGGGAGAGTGCTTTTCTATTGCGTTTGGAA
CACGCTCCTATCATTTTCACTCATTTTCAGAGCTTGGGATGGATCTGTCC
AGTTGGAAAGAGCTCAAAACCAATTTCAGTGCAGATGCAAATAATCCTAA
CAAATTATTCTATAAATACACCACAAATAGCAATACTTTGTGAGGTTAAT
GGCTCTTACTTATCAAATAAGGAAACTGAAAAACACAAGTTGGATCATGC
GACAAAAGCAGATTGATTCTGCAGCCAGAGATCGGCTTCATCCTTCTGGG
AAGCATCACCATCCTACACAACTTCAGGAGAAATGAATAGTCAGTGGGCT
AGCTCATGATGCACAGCAATTCCTACCTCTGTAAAAGCAACTAACCATTG
CTCAGCAACTGGTCTGCACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTATGCATGTGAATGTGAGTATATGTGTGTGTGTTTGCATGACCCC
GCTTACTTCTCCCTTTTTCTATTCTTAGCTACTTACCTACAATCCTACTT
TACTCTCCCTTATTCCCCCCACTATACCATCTCCTCATTATTTCCCATCC
TCCTTTCTCCTTCTCTTTTATATTTCTCTCTCTCTCTCTTTACTTTCTCT
CCTTTTTTCTACTTCTTCTTCCTCTTTTCTCTCCTCCTC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXAGAAACTGCTAGAAATATTGAGCTTATTGAGCAGTAAGTCTCGG
AGGCTGAAAACATTCTAGGCCTAGATAAGATTGTACAGAGGCTAGAAGCT
TCCAGGACTAGGCCTACGTTAGCAGATGGAAGCAGTAAGCCTCTGAGATG
ACAATTACATCAGGCGAATAAAAGTGACTTTTACACCTTATTAATAAAGA
AACTCTGCCTTAAACAAAGGACGAGTCAAGAACCTAGCACTGTCCTCTGC
CCTCCATTCATCAGCACTCGCATCAGACATGTACAATGATGGAATATGAG
ACGGTCTCACTAGAAAGAAAATGAAGACTATGCCATCTGATCATCTTCCT
TAGAGACTGGTCCTGAGGCTGGTGGGGAAGAGTGTGATGCAGGTGTCCTA
TTGGTAGCTGAGCACTTCCTAGACACATACTCTCTATGCTGTGATCAGTT
TTGAATTAGGAAATTAAATTTCCACACATAAAAATAGCATATGAATACTA
GTAAACACCTTGTAACCTTAACAACTATGAAGGCAGTACGGGGCTGCTGA
GATGGCTTAGTCCTCAAACGGCCTGCTGTGCGAGCATGGTGCCCTGTTTT
CCAGCCTCAGGACCCAGGTCAAAAAGAACCGACTTGTACCT

Query= MSMg01no334_a02.b1 MSMg01no334_a02.b1 CHROMAT_FILE:
MSMg01no334_a02.b1 PHD_FILE: MSMg01no334_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:18 2005
         (469 letters)



>mm_chr12_55072236_55073103
          Length = 868

 Score =  824 bits (426), Expect = 0.0
 Identities = 458/474 (96%), Gaps = 12/474 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgggagagtgcttttctattgcgtttggaacacgctcctatcattttcactcattttcag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggagagtgcttttctattgcgtttggaacacgctcctatcattttcactcattttcag 260

                                                                       
Query: 61  agcttgggatggatctgtccagttggaaagagctcaaaaccaatttcagtgcagatgcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcttgggatggatctgtccagttggaaagagctcaaaaccaatttcagtgcagatgcaa 320

                                                                       
Query: 121 ataatcctaacaaattattctataaatacaccacaaatagcaatactttgtgaggttaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataatcctaacaaattattctataaatacaccacaaatagcaatactttgtgaggttaat 380

                                                                       
Query: 181 ggctcttacttatcaaataaggaaactgaaaaacacaagttggatcatgcgacaaaagca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctcttacttatcaaataaggaaactgaaaaacacaagttggatcatgcgacaaaagca 440

                                                                       
Query: 241 gattgattctgcagccagagatcggcttcatccttctgggaagcatcaccatcctacaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gattgattctgcagccagagatcggcttcatccttctgggaagcatcaccatcctacaca 500

                                                                       
Query: 301 acttcaggagaaatgaatagtcagtgggctagctcatgatgcacagcaattcctacctct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acttcaggagaaatgaatagtcagtgggctagctcatgatgcacagcaattcctacctct 560

                                                                       
Query: 361 gtaaaagcaactaaccattgctcagcaactggtctgcactctgtgtgtgtgtgtgtgtgt 420
           ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| 
Sbjct: 561 gtaaaagcaactaaccattgctcagcaag-ggtctgcactctgtgtgtgtgtgtgtgtgc 619

                                                                 
Query: 421 gtgtgtgtgt--gtgtgtatgcatgtgaatgtgagtat----atgtgtgtgtgt 468
           || ||       |||||||||||||||||||||||| |    ||||||||||||
Sbjct: 620 gtatg-----cagtgtgtatgcatgtgaatgtgagtgtgtgcatgtgtgtgtgt 668


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 868
Length adjustment: 10
Effective length of query: 459
Effective length of database: 858
Effective search space:   393822
Effective search space used:   393822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)