Query= MSMg01no334_g16.b1 MSMg01no334_g16.b1 CHROMAT_FILE:
MSMg01no334_g16.b1 PHD_FILE: MSMg01no334_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:50 2005
(649 letters)
>mm_chr12_44008559_44009611
Length = 1053
Score = 1007 bits (521), Expect = 0.0
Identities = 618/653 (94%), Gaps = 7/653 (1%)
Strand = Plus / Minus
Query: 1 tgacttgccaaaacttgccatggaaccattattgacacaggttatttgactcgtggagac 60
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tgacttgccaaaatttgctatggaaccattattgacacaggttatttgactcgtggagac 781
Query: 61 tttgttcacattattccttcatggtcataattaagctcaattccatggcttgcttattct 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tttgttcacattattctttcatggtcataattaagctcaattccatggcttgcttattct 721
Query: 121 ggttatttggatttctactgattgtaccgttaactaaatgttatattaagcaagctcgat 180
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 720 ggttatttggatttctactgattgtaccattaactaaatgttatattaagcaagctggat 661
Query: 181 agatttgagattggactctgttggtcagataatttatggttggagagagtggaataatca 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 660 agatttgagattggactctgttggtcagataatttatggttggagagagtggaatagtca 601
Query: 241 taatata-ttctaccaaagcaaagatggtgtacaaatcaaggatatgcattgggtgagtc 299
||| | | ||||||| |||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 600 taagaaaattctaccgaagcaaagatggtgtagaaatcaaggatatgtgttgggtgagtc 541
Query: 300 aattgtcaatagattttgaatgctggagaacaatactgttaatgatgcagctgcaaatgc 359
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct: 540 aattgtcaatagattttgaatgctggcgaacaatactgtcaatgatgcagctgcaaaagc 481
Query: 360 actcgtcaagttttatttcctctggagtactggaaaattaatgacttcaaatggcagata 419
||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 480 acttgccaagttttatttcctctggagtactggcaaattaatgacttcaaatggcagata 421
Query: 420 tttaccacctcacagtttttcagtccagaaatatta---cagaatttcagcagatccaca 476
||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 420 tttaccaccacacagtttttcagtccagaaatattaaatcagaatttgagcagatccact 361
Query: 477 cgctttggtggccatagagctaacatggtctatacatcatccagattctaggagtcatgg 536
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cactttggtggccatagagctaacatggtctatacatcatccagattctaggagtcatgg 301
Query: 537 tcttatttggtttggaactatgtccctctgactctgtgatcacagtgtgctcttattcca 596
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 300 tcttatttggtttggaactgtgtccctctgactctgtgatcacagtgtgctcttaatcca 241
Query: 597 ttttgtagcatcacactatgcctttttcagatgataataatgacagtattgtt 649
|||||||||||||| || |||||||||||||| ||||||| | ||||||||
Sbjct: 240 ttttgtagcatcactctctgcctttttcagataataataa---ctgtattgtt 191
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1053
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1043
Effective search space: 666477
Effective search space used: 666477
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_g16.g1 MSMg01no334_g16.g1 CHROMAT_FILE:
MSMg01no334_g16.g1 PHD_FILE: MSMg01no334_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:50 2005
(610 letters)
>mm_chr12_43823619_43824636
Length = 1018
Score = 1069 bits (553), Expect = 0.0
Identities = 599/619 (96%), Gaps = 9/619 (1%)
Strand = Plus / Plus
Query: 1 tcaatccacaccaaaaacaaaaccaaaacaaaccaaacaaacaaacaaaaaacccc-aag 59
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 200 tcaatccacaccaaaaacaaaaccaaaacaaaccaaccaaacaaacaaaaaaccccaaag 259
Query: 60 attccagctcaatctatatggtctctctttttagacagaataaattaatcatttcatttt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 attccagctcaatctatatggtctctctttttagacagaataaattaatcatttcatttt 319
Query: 120 aaagaatattattgttttagttactttaatattgctgtgataaaacataaccgattcaac 179
||||||||||||||||||||||||||||||| ||||||||||||| || ||| |||||||
Sbjct: 320 aaagaatattattgttttagttactttaatactgctgtgataaaatatgaccaattcaac 379
Query: 180 ctgttaatgaaaaagtatatttgtagcttacagttttagagggttagagtatatatgatc 239
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 380 ctgttaatgaaaaagtatatttgtagcttacagttttacagggttaaagtatatatgatc 439
Query: 240 atcatgacagtatacaggcaagcaagcatggtactgtagttgtagatgagagctttaata 299
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 440 atcatgacagtagacaggcaagcaagcatggtactgtagttgtagatgagagatttaata 499
Query: 300 tttacacataaccatgaggtagagaggagtcttttcaaagcctgcccctgataacatacc 359
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttacacataactatgaggtagagaggagtcttttcaaagcctgcccctgataacatacc 559
Query: 360 ccctaatttcccaaatagttgctacaagaggggaacagatatacattagccaatgaggtc 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ccctaatttcccaaatagttgctacaagaggggaacagatatacattagccaatgaggtt 619
Query: 420 cattatgcttcaatcacaattatcaaaataataaaatattctggactatctagaacattc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cattatgcttcaatcacaattatcaaaataataaaatattctggactatctagaacattc 679
Query: 480 tgtgatggtattgagtctttgtagaagtgatattatatagtcatgctacttgttgaatat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgtgatggtattgagtctttgtagaagtgatattatatagtcatgctacttgttgaatat 739
Query: 540 atatat--------gacattcttcgtattgtgagaaagccaccaaaatcagtgttctagt 591
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atatatatattaatgacattcttcgtattgtgagaaagccaccaaaatcagtgttctagt 799
Query: 592 ttgtgacaatatgtagtag 610
|||||||||||||||||||
Sbjct: 800 ttgtgacaatatgtagtag 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1018
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1008
Effective search space: 604800
Effective search space used: 604800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
