Query= MSMg01no334_j18.b1 MSMg01no334_j18.b1 CHROMAT_FILE:
MSMg01no334_j18.b1 PHD_FILE: MSMg01no334_j18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:05 2005
(286 letters)
>mm_chr12_74738216_74738901
Length = 686
Score = 470 bits (243), Expect = e-137
Identities = 275/291 (94%), Gaps = 12/291 (4%)
Strand = Plus / Plus
Query: 2 tagaaggtcataaaaggcaattttaacacagatcttggtggtgaggcccctcactgagcc 61
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 202 tagaaggtcataaaaggcaattttaacacagatcttggtggtgaggttcctcactgagtc 261
Query: 62 tgccctgatgctatcaggagacctgagaatgggtgagccatgcagcagctgtaacatggc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgccctgatgctatcaggagacctgagaatgggtgagccatgcagcagctgtaacatggc 321
Query: 122 aggct-cctgtacagtgaggttgtttttgctaagtatgactgtattttcaaataatgaca 180
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aggctgcc-gtacagtgaggttgtttttgctaagtatgactgtattttcaaataatgaca 380
Query: 181 agcattcttataggaacttataagccagtactcattgtctgttatcaagtgttatgtgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcattcttataggaacttataagccagtactcattgtctgttatcaagtgttatgtgta 440
Query: 241 -----ttatttttttgcacatgctgcactcttctgtccctgacagctcaga 286
| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggacgtaatt-----gcacatgctgcactcttctgtccctgacagctcaga 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no334_j18.g1 MSMg01no334_j18.g1 CHROMAT_FILE:
MSMg01no334_j18.g1 PHD_FILE: MSMg01no334_j18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:05 2005
(283 letters)
>mm_chr12_74904961_74905643
Length = 683
Score = 507 bits (262), Expect = e-148
Identities = 274/278 (98%), Gaps = 2/278 (0%)
Strand = Plus / Minus
Query: 5 caaaaacaaaaacaaa-aacaaaaaaatgctgcaaaggcacagagaaaccatcacacaga 63
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caaaaacaaaaacaaacaa-aaaaaaatgctgcaaaggcacagagaaaccatcacacaga 447
Query: 64 gatgtagtattcaagaaccaatacatacagaagagcttaattgtgaaaactaatagtcaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gatgtagtattcaagaaccaatacatacagaagagcttaattgtgaaaactaatagtcaa 387
Query: 124 agccaaggggattctaaggaaatccaaccaagccacacttcatgaatgcatgaccaagaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 agccaaggggattctaaggaaatccaaccaagccacacttcatgaatgcatgaccaagaa 327
Query: 184 taggtaaaatgacattttattaagaatttggaaggtttgaccgccaagtctatatctgtc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 taggtaaaatgacattttattaagaatttggaaggtttgaccgccaagtctatatctgtc 267
Query: 244 tatctataatctttcttctgaagtcacagaggtttcag 281
||| |||||||||||||||||||||||||||||||||
Sbjct: 266 gatcgataatctttcttctgaagtcacagaggtttcag 229
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
