Query= MSMg01no335_g05.b1 MSMg01no335_g05.b1 CHROMAT_FILE:
MSMg01no335_g05.b1 PHD_FILE: MSMg01no335_g05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:08 2005
(429 letters)
>mm_chr12_43765468_43766301
Length = 834
Score = 723 bits (374), Expect = 0.0
Identities = 415/432 (96%), Gaps = 7/432 (1%)
Strand = Plus / Minus
Query: 5 gaattcacctaccaataaaatgcttattggcaaatgcaggattagaaggtgggacatttg 64
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 794 gaattcacctgccaataaaatgcttattggcaaatgcaggattaggaggtgggacatttg 735
Query: 65 gc--agagagagagagaggaattcaggcacagggagagtcacctggacacagaggaagac 122
|| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 734 gcagagagagagagagaggaattcaggcacagggagattcacctggacacagaggaagac 675
Query: 123 aaacacaaaagcctaaggagaggttactaaccatgtagcatgacttagactagtcaaaac 182
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 aaacccataagcctaaggagaggttactaaccatgtagcatgacttagactagtcaaaac 615
Query: 183 agcata-----catggaaatgaaccaaagctattggcctaggcatttattcatatttaag 237
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 agcatacagctcatggaaatgaaccaaagctattggcctaggcatttattcatatttaag 555
Query: 238 aagtctgggagtcttttactttggagcaaagggggtaggtggaaaatcttgcagctacat 297
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 554 aagtctgggagtcttttactttggagcaaagggggtgggtggaaaatcttgcagctatat 495
Query: 298 ttacctaatgcacatcatgtcaaatatttttccataagtatatggattaatgaaactaaa 357
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 494 ttacctaatgcacatcatgtcaaatatctttccataagtatatggattaataaaactaaa 435
Query: 358 tttattatagaaatgtgtagatgaagacagtagaatatatatcagggaagactaatttac 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tttattatagaaatgtgtagatgaagacagtagaatatatatcagggaagactaatttac 375
Query: 418 agcattgaaaga 429
|| |||||||||
Sbjct: 374 agtattgaaaga 363
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 834
Length adjustment: 9
Effective length of query: 420
Effective length of database: 825
Effective search space: 346500
Effective search space used: 346500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no335_g05.g1 MSMg01no335_g05.g1 CHROMAT_FILE:
MSMg01no335_g05.g1 PHD_FILE: MSMg01no335_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:08 2005
(424 letters)
>mm_chr12_43593852_43594675
Length = 824
Score = 797 bits (412), Expect = 0.0
Identities = 421/424 (99%)
Strand = Plus / Plus
Query: 1 agaacacgataggcagcatgcataacagtgagaagtatgaagggagaggaaactcttcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaacacgataggcagcatgcataacagtgagaagtatgaagggagaggaaactcttcac 260
Query: 61 tggttacgtatacatgtgataaaatgtacttgtgtatccttcaaaccctcatccctgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggttacgtatacatgtgataaaatgtacttgtgtatccttcaaaccctcatccctgata 320
Query: 121 atgttgcaagctttctatagagtttacttcatggatttactaggtttgaagttgtgagag 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 atgttgcaagctttctatagagtttacttcatagatttactaggtttgaagttgtgagag 380
Query: 181 cttaggcagtcacaaaccttagggaggcctcaggcttcatttaattttcctatataacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttaggcagtcacaaaccttagggaggcctcaggcttcatttaattttcctatataacca 440
Query: 241 tagtcattgttcagcttttgctttagaatttaagttttgtctttcccattttattttttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagtcattgttcagcttttgctttagaatttaagttttgtctttcccattttattttttt 500
Query: 301 atgatactggagattggaactagaacatttaagaactttatcactgagctacatctctaa 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgatactggagattggatctagaacatttaagaactttatcactgagctacatctctaa 560
Query: 361 acttatttttattttctaggaaatattctaaataacttatttttacttttaaaacatctg 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 561 acttatttttattttctaggaaacattctaaataacttatttttacttttaaaacatctg 620
Query: 421 cagc 424
||||
Sbjct: 621 cagc 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
