Query= MSMg01no336_k02.b1 MSMg01no336_k02.b1 CHROMAT_FILE:
MSMg01no336_k02.b1 PHD_FILE: MSMg01no336_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:44 2005
(577 letters)
>mm_chr12_77203029_77204005
Length = 977
Score = 1009 bits (522), Expect = 0.0
Identities = 555/566 (98%), Gaps = 2/566 (0%)
Strand = Plus / Plus
Query: 13 ctgtctccattggtgctgcagcctaagactgtggaaggaacccccaccagcccgggaacc 72
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 213 ctgtctccattggtgctgcagcctaagactgtggaaggaaaccccaccagcccgggaacc 272
Query: 73 ctctccctatgcaatggttcggcttctcccagcattaggcttgtgttcctcacccgccca 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ctctccctatgcaatggttcggcttctcccagcattaggcttgtgttcctcacccgccca 332
Query: 133 agttcaacagctcagcttgtctactggctgtgaaaccacacctgttaccggagatacaaa 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 agttcaacagctcagcttgtctactggctgtgaaaccacacctgttaccggagatacaaa 392
Query: 193 gtctcatttctaagagagatcaatttatttttgcaaaggcctgaatagaccaatcatttc 252
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 393 gtctcatttctaagagagatcaatttatttttgcaaaggcctgaatagaccaatcagctc 452
Query: 253 tgagggagcagaagagtcactgtgtacatgaaaggataaatgcttgataatgaatgacct 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tgagggagcagaagagtcactgtgtacatgaaaggataaatgcttgataatgaatgacct 512
Query: 313 agagaggcagaggatccagtgtttcccgttcacagtgaggaaaatgctgaacacctcgac 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 agagaggcagaggatccagtgtttcccgttcacagtgaggaaaatgctgaacacctcgac 572
Query: 373 tgggtgatacggaggggtgggaacactgtaaaacagcgt-gggagtgtaaaagtgctacc 431
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 573 tgggtgatacggaggggtgggaacactgtaaaacagc-tcgggagtgtaaaagtgctacc 631
Query: 432 acaggagctgtctcatacgatcaggggtcacctctgactttcccatcatttgtgtggata 491
| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||
Sbjct: 632 ataggagctgtctcatacgatcagaggtcacctctgactttcccatcattggtgtagata 691
Query: 492 cccttaggaaggatatagaaacagaccacttcactcccatcattgacgtaccatctgttt 551
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 692 cccttaggaaggatatagaaacaggccacttcactcccatcattgacgtaccatctgttt 751
Query: 552 ccttggctgttgctggttttctgccc 577
|||||||||||||||| |||||||||
Sbjct: 752 ccttggctgttgctggctttctgccc 777
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_k02.g1 MSMg01no336_k02.g1 CHROMAT_FILE:
MSMg01no336_k02.g1 PHD_FILE: MSMg01no336_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:44 2005
(341 letters)
>mm_chr12_77254887_77255628
Length = 742
Score = 574 bits (297), Expect = e-168
Identities = 330/341 (96%), Gaps = 1/341 (0%)
Strand = Plus / Minus
Query: 1 cagaagatgttgt-gggggagtgtctcagggaggcgtggatgttctgccctccatggaac 59
||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 541 cagaagatgttgtggggggagtgtctcagagatgcgtggatgttctgccctccatggaac 482
Query: 60 ggaaagaacgactcttcatgcttctcactgcagtgacaaatatcttcaagggaacagttg 119
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 481 ggaaagaaagactcttcatgcttctcactgcagtgacaaatgtcttcaagggaacagttg 422
Query: 120 aaaggacaaaattccattttggctgatgctcttaggagtttttgtccacggtcagctggc 179
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 421 aaaggacaaaactccattttggctgatgctcttaggagtttctgtccacggtcagctggc 362
Query: 180 ttgttaggtcaccaggaggcaggagtctcatgggggaggagagagtggagggaaactgtt 239
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgttaggtcactgggaggcaggagtctcatgggggaggagagagtggagggaaactgtt 302
Query: 240 tactttatggtgaccaggaagcaaggaagggtgcaaggggccagggactagctgtgcatt 299
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 301 tactttatggtgaccaggaagcaaggaagggtgcaaggggccaaggacaagctgtgcatt 242
Query: 300 tcagacaaacacaaacaagtcccctgaccagacctcgcttc 340
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcagacaaacacaaacaagtcccctgaccagacctcgcttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 742
Length adjustment: 9
Effective length of query: 332
Effective length of database: 733
Effective search space: 243356
Effective search space used: 243356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
