Query= MSMg01no336_m01.b1 MSMg01no336_m01.b1 CHROMAT_FILE:
MSMg01no336_m01.b1 PHD_FILE: MSMg01no336_m01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:54 2005
(631 letters)
>mm_chr12_102110115_102111143
Length = 1029
Score = 1145 bits (592), Expect = 0.0
Identities = 618/628 (98%), Gaps = 4/628 (0%)
Strand = Plus / Minus
Query: 5 gaattctgctattactatgccaaaagccaaatctatgaatatctcctttgaaacatgaat 64
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 gaatcctgctattactatgccaaaagccaaatctatgaatatctcctttgaaacatgaat 770
Query: 65 cataagattgttggcagcttttccacgatgtcaatagtattgtagtcatcta-ttttttt 123
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 769 cataagattgttggcagcttttccacgatgtcaatagtattgtagtcatctatttttttt 710
Query: 124 tttaattgtcaggatatcctctttatcagagttcctcctggtgtggaatttgtactgaac 183
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 709 tttaattgtcaggatatcctctttatcagagt---tcctggtgtggaatttgtactgaac 653
Query: 184 aaaaatgataactcaaagagacctgggcagtgaggcttccaagccaaggtgtatttgctg 243
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 652 aaaaatgataactcaaagagacctgggccgtgaggcttccaagccaaggtgtatttgctg 593
Query: 244 agttgtgaggtcttgggtggaggactggccccatttttagtgtcttccacagaacaagca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 agttgtgaggtcttgggtggaggactggccccatttttagtgtcttccacagaacaagca 533
Query: 304 tggaccctgaaagtgtgaaccctgcaggtgtgaatcctggccagaatagcaaatagaaga 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 532 tggaccctgaaagtgtgaaccctgcaggtgtgaatcctggccagaatagcaaatagcaga 473
Query: 364 cactggaggttcatactaaagattttctctttacacttatattttattggagtgtaaaat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 cactggaggttcatactaaagattttctctttacacttatattttattggagtgtaaaat 413
Query: 424 ccataccatgtgttcctttttcacaatgaaggccccttaaagaaccataccagacacaca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ccataccatgtgttcctttttcacaatgaaggccccttaaagaaccataccagacacaca 353
Query: 484 cgtgtaaagacatgaaacaacatttagtaggctcagatcccacatgaaatgtcaccatga 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tgtgtaaagacatgaaacaacatttagtaggctcagatcccacatgaaatgtcaccatga 293
Query: 544 tgtcaggaataaatgtgtaatggggcctggtcagtggctcagtttctggttttgttgaga 603
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tgtcaggaataaatgtgcaatggggcctggtcagtggctcagtttctggttttgttgaga 233
Query: 604 aatgtagggttggaggatgtgaaagatc 631
||| ||||||||||||||||||||||||
Sbjct: 232 aatttagggttggaggatgtgaaagatc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1029
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1019
Effective search space: 632799
Effective search space used: 632799
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_m01.g1 MSMg01no336_m01.g1 CHROMAT_FILE:
MSMg01no336_m01.g1 PHD_FILE: MSMg01no336_m01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:54 2005
(475 letters)
>mm_chr12_101893858_101894732
Length = 875
Score = 903 bits (467), Expect = 0.0
Identities = 473/475 (99%)
Strand = Plus / Plus
Query: 1 aaatgtgtcttggaatggctatgctcaataccatttcaggagttaaatctttaatgagac 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 aaatgtgtcttggaatggctatgctcaatactatttcaggagttaaatctttaatgagac 260
Query: 61 cactttgagtttggactcagttttaatccagatcactgctcctattactttgctaacagc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 cactttgagtttggactcagttttaatccagatcactgctcctattactttgctaacaac 320
Query: 121 tccccgtatctagcccataattctattatcatctacctactagagtaagaaagctttatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccccgtatctagcccataattctattatcatctacctactagagtaagaaagctttatg 380
Query: 181 agaaaggctctccactctgattcagttcagttaagaactagatcagtaccaacacttgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaaaggctctccactctgattcagttcagttaagaactagatcagtaccaacacttgat 440
Query: 241 atgccatggattaatgctagactagactaatcctgagggaaagaatccaacccttgagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgccatggattaatgctagactagactaatcctgagggaaagaatccaacccttgagag 500
Query: 301 ggaacaggccatgccaggtcctcagctaaccacacccttctacataccgattcacaatcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggaacaggccatgccaggtcctcagctaaccacacccttctacataccgattcacaatcc 560
Query: 361 tcaccacagccagtgaagtggtactttcaggtattctatttcagatgtaaggaaataagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcaccacagccagtgaagtggtactttcaggtattctatttcagatgtaaggaaataagt 620
Query: 421 tcatagtaattaatgaaactggccaaaaggcgtgatctagaggaaagataaacaa 475
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcatagtaattaatgaaactggccaaaaggcgtgatctagaggaaagataaacaa 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
