Query= MSMg01no337_k10.b1 MSMg01no337_k10.b1 CHROMAT_FILE:
MSMg01no337_k10.b1 PHD_FILE: MSMg01no337_k10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:05 2005
(610 letters)
>mm_chr12_96485391_96486398
Length = 1008
Score = 1139 bits (589), Expect = 0.0
Identities = 602/607 (99%), Gaps = 2/607 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaagtcatctactgttacaacgatcattaattatacctttctcacaaagccaaa 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ggaattcaagtcatctattgttacaacgatcattaattatacctttctcacaaagccaaa 749
Query: 64 ataatcccatttctaggggtcttatttacagtaaatgatattagcattcatgctttaaaa 123
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 748 ataatcccatttctaggggtcttatttacagtaaatgatattaggattcatgctttaaaa 689
Query: 124 tccaacttgcaagagactgtgccttcagtggcctaatggctacaatgttctctgtgatag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 tccaacttgcaagagactgtgccttcagtggcctaatggctacaatgttctctgtgatag 629
Query: 184 atacacatacattttgtgaggtagctggtaagggtgttgctgtattaatcaaaacactgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 atacacatacattttgtgaggtagctggtaagggtgttgctgtattaatcaaaacactgt 569
Query: 244 gatgccactcaccaaagaccaagctgtctttgaagacaattaaaggctatgttttttgag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gatgccactcaccaaagaccaagctgtctttgaagacaattaaaggctatgttttttgag 509
Query: 304 tttatcaaaggagattaaccaaaccacattgggagtgtttgcttcactctgactcccccc 363
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 508 tttatcaaaggagattaaccaaaccacattgggagtgtttgcttcactctgaatcccccc 449
Query: 364 tccccaccacacacacaaacacacagaatttttgcattcatagaacaacacatcagtaca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tccccaccacacacacaaacacacagaatttttgcattcatagaacaacacatcagtaca 389
Query: 424 gtttttgctttttttgtgtgcttttttttttatggaatattgcattattgatgagtaagc 483
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 388 gtttttgctttttttgtgtgc--ttttttttatggaatattgcattattgatgagtaagc 331
Query: 484 atgaaactcccttatatttcaaactcctttcagatgatctgggctatttcaaaatgttat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 atgaaactcccttatatttcaaactcctttcagatgatctgggctatttcaaaatgttat 271
Query: 544 ttgaactcagaaaagcatccttatcccataaaatcacagcctactgaagcttttcacggc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ttgaactcagaaaagcatccttatcccataaaatcacagcctactgaagcttttcacggc 211
Query: 604 ctactgg 610
|||||||
Sbjct: 210 ctactgg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1008
Length adjustment: 10
Effective length of query: 600
Effective length of database: 998
Effective search space: 598800
Effective search space used: 598800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_k10.g1 MSMg01no337_k10.g1 CHROMAT_FILE:
MSMg01no337_k10.g1 PHD_FILE: MSMg01no337_k10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:06 2005
(495 letters)
>mm_chr12_96307961_96308857
Length = 897
Score = 919 bits (475), Expect = 0.0
Identities = 491/497 (98%), Gaps = 2/497 (0%)
Strand = Plus / Plus
Query: 1 cattacagcagactataaatgcttaaagcagaataaggtgtagacaaggtgttgtaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattacagcagactataaatgcttaaagcagaataaggtgtagacaaggtgttgtaagtg 260
Query: 61 ttgctattagagagcagatgggtaaaaaaagcactttcatgtaatatctgagtacagagc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 ttgctattagagagcagatgggtaaaaaaagcactttcatgtaatatctgagcacagagc 320
Query: 121 tgaaggaagtgaggcagaagccctgcaaaaggagcagaaagagctaatgccttcgggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaaggaagtgaggcagaagccctgcaaaaggagcagaaagagctaatgccttcgggaag 380
Query: 181 aactagcatcctgcttctgagagtttccaagggaagcactgactgtgacaaggacactga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aactagcatcctgcttctgagagtttccaagggaagcactgactgtgacaaggacactga 440
Query: 241 aaagagagtccaggaactc--cttgtgggtgcatcagataggacgtgaatggattgcatt 298
||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 aaagagagtccaggaactctccttgtgggtgcatcagataggacatgaatggattgcatt 500
Query: 299 taataaatagggaagtgaccagtgagcagtgatttaaaaagttcctgtgacagcatctga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taataaatagggaagtgaccagtgagcagtgatttaaaaagttcctgtgacagcatctga 560
Query: 359 ccttcattttaaagagatggctgtggatcttttgcaactagattataaaattaaagggtt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 ccttcattttaaagagatggctgtggatcttttgcaactagattataaaattaaaggata 620
Query: 419 aattagagacctgggaggtgcctctaaaagtatccaaaggaactatgatgatacctccct 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aattagagacctgggaggtgcctctaaaagtatccaaaggaactatgatgatacctccct 680
Query: 479 tgttattttctgttgac 495
|||||||||||||||||
Sbjct: 681 tgttattttctgttgac 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 897
Length adjustment: 10
Effective length of query: 485
Effective length of database: 887
Effective search space: 430195
Effective search space used: 430195
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
