Query= MSMg01no337_p20.b1 MSMg01no337_p20.b1 CHROMAT_FILE:
MSMg01no337_p20.b1 PHD_FILE: MSMg01no337_p20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:31 2005
(509 letters)
>mm_chr12_95801334_95802242
Length = 909
Score = 808 bits (418), Expect = 0.0
Identities = 451/464 (97%), Gaps = 8/464 (1%)
Strand = Plus / Minus
Query: 50 aaatgttcaaagtccttagtgatcagagacatgcaat----aacaaccctgcaattctac 105
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 909 aaatgttcaaagtccttagtgatcagagacatgcaattcaaaacaaccctgcaattctac 850
Query: 106 tttacaccaatcagaatagcaaagttcaaaacctcaagtgaccacacttgttggcaagga 165
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 849 tttacaccaatcagaatagcaaagttcaaaacctcaagtgacaacacttgttggcaagga 790
Query: 166 tgtggagaaagaggaactctcctccattgctgatggaatttaaaactggtacaaccactc 225
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 789 tgtggagaaagaggaactctcctccattgctgatgggatttaaaactggtacaaccactc 730
Query: 226 tagaaatcaatttggaggtgccaactccttgccggcaggtccaggtgagaggacagaggt 285
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 729 tagaaatcaatttggaggtgccaactccttgccggcaggtccaggtgagagaacagaggt 670
Query: 286 cccagtcccacaggggcctc-tctgaggctgaggaggatggcacaaaagaaacacactga 344
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 669 cccagtcccacaggggcctcat-tgaggctgaggaggatggcacaaaagaaacacactga 611
Query: 345 accagggctcttgttcatctttgtggca-tcagcctctcgcttatttaagttcaaaacct 403
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 610 accagggctcttgttcatctttgtggcact-agcctctcgcttatttaagttcaaaacct 552
Query: 404 aggaagggggaattttggtggagtaagttgtaggtgtcctaggaaagatgacagagggta 463
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aggaagggggatttttggtggggtaagttgtaggtgtcctaggaaagatgacagagggta 492
Query: 464 tggagtaactggcaaggccaatggcaaaactctacatgggtaca 507
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tggagtaactggcaaggccaatggcaaaactctacatgggtaca 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_p20.g1 MSMg01no337_p20.g1 CHROMAT_FILE:
MSMg01no337_p20.g1 PHD_FILE: MSMg01no337_p20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:32 2005
(497 letters)
>mm_chr12_95585433_95586323
Length = 891
Score = 779 bits (403), Expect = 0.0
Identities = 471/497 (94%), Gaps = 6/497 (1%)
Strand = Plus / Plus
Query: 1 aaagcatggagggaagggaaactgtattcagaatatatgagcaaatctatttaataaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagcatggagggaagggaaactgtattcagaatatatgagcaaatctatttaataaata 260
Query: 61 gtaagtgggaaatggagttgtaaatgtatctctgacatgataccattgcaaaatgctcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaagtgggaaatggagttgtaaatgtatctctgacatgataccattgcaaaatgctcag 320
Query: 121 attctagcccaaacttttcttcctcttgattctttaacttcattaagcctataaaatatg 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attctagcccaaaattttcttcctcttgattctttaacttcattaagcctataaaatatg 380
Query: 181 gtgataatttggaataagaattccccaaaggataccgaactaaaggcatagtccagatag 240
|| ||||||||||||||| |||||||||||||||| | ||||| |||||||||||
Sbjct: 381 gtaataatttggaataaggattccccaaaggatactgtactaa------agtccagatag 434
Query: 241 atttgattgcttgatgatgtagcctttaagatggaaagtttaatgtgagggcataagtca 300
|||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 435 attttattgcttgatgatgtagcctttaagatggaaagcttaatgtgaaggcataagtca 494
Query: 301 ttgggagtatatcactaaggggtattttcaaattctatttctgaggggattgtaattcca 360
||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 495 ttgggagtatatcactaagatgtattttcaaattctatttctgaggggattgtaacccca 554
Query: 361 gagaaagagcgacaataccaactaacctggaccactcagaactcctagagattaagtctc 420
|||||||| | ||||| |||||||| |||||||||||||||||||||||||||||| | |
Sbjct: 555 gagaaagaacaacaatgccaactaatctggaccactcagaactcctagagattaagccgc 614
Query: 421 caattaaggagcatacttgggcatgtctatggcccaagtcacatgtgtagcagaggactg 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 615 caattaaggagcatacttgggcatgtctatggcctaagtcacatgtgtagcagaggactg 674
Query: 481 ccttgtctgtcttcagt 497
||||||||||| |||||
Sbjct: 675 ccttgtctgtcctcagt 691
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 891
Length adjustment: 10
Effective length of query: 487
Effective length of database: 881
Effective search space: 429047
Effective search space used: 429047
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
