XXXXXXXXXXXXXXXXXXXXXXXXXXXTTACGATCCGCGGAATTCCTGAT
ATTGATTTGCCTTTCGTATCTACTGTAATTTCTTTCTCAGTAATTTTATT
GTTCATGCACTTTTTTTTTAAAAGAAAAAACATCAAATATTTGAAGCCAA
GTAAGATTACATAAGTCTAGGAAGCTGGGCATGTGTATACCTGTCAGTAT
TGGAGAGGCTGAGACAGAAGGGCCAGTGAGACCCTGCCTCAAAAATAAAT
AAATAGCTGAACGAACGAATGAATGTACAAACTTGAAAAATGCAGATTTA
AAGCCGTTTTGAAAATCTGTTTCACTGTTGCTGTCCCTCATTGTCTTTCC
TCCTTTCTTTTTCCCTTCCCAATCCCCTTTTTTGTTGCTCCTTTTCTCTC
TACTTTGTAGTCTAGGCTGGCTTTGAACTTGCAGTCTTCCTATCCCACTT
GGCCTTCCTGACCCTCTTGAGTGCTGGGGCCCTTTTAGTATTTTGAGCTT
CAGAGGAAATCAGATCCTGATGTTTCCATGTTTAAATGTGTGAGCCTTTA
CTCTTGGGCCTCTGTTTTTCTGTCAATGAAATGAATCATTTTACTTTTTT
ATGTTATTGTCTGGTTTTCAAAGCTAGGTAGATAACCTCTGACCTTTCCC
TTGACTGTATCTTAGNTCTGTAACTACTATCCTATCCTGAGTAATATTTA
AAAAATGAGGCCATGCCTGCT

TGATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGTACCCATTTTTAATGG
GAATATTTAAATTTCTGAAGTCTAGCTTTTGAGTTCTTTGTATATATTGG
ATATTACTCCCCTATCAGATTTAGGATTGGTAAAAATCCTTTCCCAATCT
GTTGGTGGCCTTTTTGTCTTATTGACAGTGTCATTTCCCTTACAGAAGCT
TTGCAATTTTATGAGTTCTCATTTGTTGATTCTTGATCTTACAGCACAAG
CCATTGTTGTTCTGGTCAAGAATTTTTCCCCTGTGCCCATTATCTTCAAG
GCTTTTCTCCACTTTCTTCTCTATAAATTTCAGTGTTTCTGGTTTTATGT
GGAGTTCTTTGATCCACTTAGACTCGAGCTTTGTACAAGAAGATAAGAAT
GGATCAATTCTCATTCTTCTATATGATAATGCCAGTTGTGCCAGCACCAT
TTGTTGAAAATGCTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTC
AAAGATCAAGTGACCATAGGTGTGTGGGTCCATCTCTGGGTCTTCAATTC
TATTCCATTGATCTATCTGTCTGTTGCTGTACCAGTACCATGCAGTTTTT
TACACAACTGCTCTGTAGTACAGTTTGAGGTCAGGCATGGTGATTCCACC
AGAGAGAGGTTCTTTTATTGTT

Query= MSMg01no338_c03.b1 MSMg01no338_c03.b1 CHROMAT_FILE:
MSMg01no338_c03.b1 PHD_FILE: MSMg01no338_c03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:42 2005
         (694 letters)



>mm_chr12_78348601_78349693
          Length = 1093

 Score = 1187 bits (614), Expect = 0.0
 Identities = 667/687 (97%), Gaps = 7/687 (1%)
 Strand = Plus / Plus

                                                                       
Query: 13  gaattcctgatattgatttgcctttcgtatctactgtaatttctttctcagtaattttat 72
           |||||||||||| ||| ||| ||||||||||||||||   ||||||||||||||||||||
Sbjct: 213 gaattcctgatagtgagttgactttcgtatctactgt--gttctttctcagtaattttat 270

                                                                       
Query: 73  tgttcatgcacttttttttt-aaaagaaaaaacatcaaatatttgaagccaagtaagatt 131
           |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 271 tgttcatgcactttttttttaaaaagaaaaaacatcaaatatttgaagctaagtaagatt 330

                                                                       
Query: 132 acataagtctaggaagctgggcatgtgtatacctgtcagtattggagaggctgagacaga 191
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 331 acataagtctaggaagctgggcatgtgtatacctgtcagtattggagaggctgagacagg 390

                                                                       
Query: 192 agggccagtgagaccctgcctcaaaaataaataaatagctgaacgaacgaatgaatgtac 251
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 agggccagtgagaccctgcctcaaaaataaataaatagctgaacgaacgaatgaatgtac 450

                                                                       
Query: 252 aaacttgaaaaatgcagatttaaagccgttttgaaaatctgtttcactgttgctgtccct 311
           ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 451 aaacttggaaaatgcagatttaaagccgttttgaaaatctgcttcactgttgctgtccct 510

                                                                       
Query: 312 cattgtctttcctcctttctttttcccttcccaatccccttttttgttgctccttttctc 371
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 cattgtctttcctccgttctttttcccttcccaatccccttttttgttgctccttttctc 570

                                                                       
Query: 372 tctactttgtagtctaggctggctttgaacttgcagtcttcctatcccacttggccttcc 431
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tctactttgtagtctaggctggctttgaacttgcagtcttcctatcccacttggccttcc 630

                                                                       
Query: 432 tgaccctcttgagtgctggggcccttttagtattttgagcttcagaggaaatcagatcct 491
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tgaccctcttgagtgctggggcccttttagtattttgagcttcagaggaaatcagatcct 690

                                                                       
Query: 492 gatgtt---tccatgtttaaatgtgtgagcctttactcttgggcctctgtttttctgtca 548
           ||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 691 gatgttgtttccatgtttaaatgtgtgagcctttacttttgggcctctgtttttctgtca 750

                                                                       
Query: 549 atgaaatgaatcattttacttttttatgttattgtctggttttcaaagctaggtagataa 608
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 atgaaatgaatcattttacttttttatgttattgtctggttttcaaagctaggtagataa 810

                                                                       
Query: 609 cctctgacctttcccttgactgtatcttagntctgtaactactatcctatcctgagtaat 668
           ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 811 cctctgaccgttcacttgactgtatcttagttctgtaactactatcctatcctgagtaat 870

                                      
Query: 669 attt-aaaaaatgaggccatgcctgct 694
           |||| ||||||||||||||||||||||
Sbjct: 871 attttaaaaaatgaggccatgcctgct 897


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1093
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1083
Effective search space:   740772
Effective search space used:   740772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)