XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAT
CATTTTATTCGCTGAGTAGTACTCCTTTGTGTAAATGTACCACATTTTCT
GTATCCATTCCTTTGTTGAAGGACATCTGGCAAATTCATTTGGAATAATA
AAATACCCAGGATAGCAAAAACTATTCTCTACAATGAAAGAACTTCTGGG
GGAAATCACCATCCCTGACCTCAAGCTGTATTACAGAGCAATCGTGATAA
AAACTGCATGGTATTGGTACAGAGATAGGCAGGAAGATCAATGAAATAGA
ACTGAAGACCCAGAAATGATTCCACACATATGGTCACTTGACATTTGACA
AAGACGCTAAAATCATCCAGTGGAAAAAAGACAGCATTTTTAACAAATGG
TGCTGGTTCAAATCCAAAACTCAAGCCCACGTGGATCAAGTACCTCCACA
TAAAACCAGATACACTGAAACCTATAGAGGAGAAATTGGGGAAGACCCTT
GAACACATGGGCACAGGGGAAAAATTTCTGAACATATCACCAAAAATGGC
CTATGCTCTAAGATCAAGAATCAACAAAATGGGGCCTCATAAAATTGCAA
AGCTTCTGTAATGCAAATGACACTATCAATAGGACAAAAAGGCCACCAAC
AGATTGGGAAAAGATCTTTACCAATCCTACATCCAATAGAAAGTTAATAT
TCAATATATACAAAAAACTCCAGAAGTTAGACTCCAGATTATCAAATAAC
CCTATG

CATGCAGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACAGACCTTCCCCTATACTTTCCCAGA
TGATGGAAGCCTCCTTGTATGACAAAATCATGGACCAGCAGCGTCTGGAA
CCTGAATTCTTCAGAGTTGGATTTTATGGGAAAAAGTTTCCATTTTTCTT
AAGAGTAAGTTATACACTACTTAATTTGCTTTAATCCTTCCAGCTCAGAT
CCTGCAATCAACAAAACTAAGATATAGTGACATTGTATGACCAGTGACAA
GAAGGAGACAGCATGTTTTGCCTTGAACAGTGTCTTAAAACCAAACAGTG
TACCCCTTCCTGTGTTTACGTTATGAAGTCTTCAGTGGTTATGTCTTCCC
TTTGGTGGTATTCACTGGTATATTCAGTGTGCAGTTCCCATAGTTAGCAT
TAGAGAATGTGGAGCAGAGCAATAGAGGGCCTTGCAGTTACAGACTGTAG
GAATTAACAGAGTCACATCAAGTCGAAATCCTACTCCAAAGCCATGGGGA
AAGTGTTGTTGGTCCTTTTTGATGGCTTTATAAAAAGGTAAATATCACCC
AGCAAAGACATCTGATTTATTGGTACTATAAATCTGCAAAGGGCAATTTC
AATACATTGTAAGGCAGTATAAAATACTTAGTATCAGCAGGGCGTGGCTG
AGCATACCTTTAATCCCAGCACTTGGGAGGCA

Query= MSMg01no338_h22.g1 MSMg01no338_h22.g1 CHROMAT_FILE:
MSMg01no338_h22.g1 PHD_FILE: MSMg01no338_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:08 2005
         (581 letters)



>mm_chr12_41538581_41539561
          Length = 981

 Score = 1036 bits (536), Expect = 0.0
 Identities = 551/556 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   acagaccttcccctatactttcccagatgatggaagcctccttgtatgacaaaatcatgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagaccttcccctatactttcccagatgatggaagcctccttgtatgacaaaatcatgg 260

                                                                       
Query: 61  accagcagcgtctggaacctgaattcttcagagttggattttatgggaaaaagtttccat 120
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accagcagcgcctggaacctgaattcttcagagttggattttatgggaaaaagtttccat 320

                                                                       
Query: 121 ttttcttaagagtaagttatacactacttaatttgctttaatccttccagctcagatcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttcttaagagtaagttatacactacttaatttgctttaatccttccagctcagatcct 380

                                                                       
Query: 181 gcaatcaacaaaactaagatatagtgacattgtatgaccagtgacaagaaggagacagca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcaatcaacaaaactaagatatagtgacattgtatgaccagtgacaagaaggagacagca 440

                                                                       
Query: 241 tgttttgccttgaacagtgtcttaaaaccaaacagtgtaccccttcctgtgtttacgtta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttttgccttgaacagtgtcttaaaaccaaacagtgtaccccttcctgtgtttacgtta 500

                                                                       
Query: 301 tgaagtcttcagtggttatgtcttccctttggtggtattcactggtatattcagtgtgca 360
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 tgaagtcttcagtggttatgtcttcccttcggtggtattcactggtatattcagtgtgca 560

                                                                       
Query: 361 gttcccatagttagcattagagaatgtggagcagagcaatagagggccttgcagttacag 420
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 561 gttcccatagttagcattagagaatatggagcagagcaatagagggccttgcagttgcag 620

                                                                       
Query: 421 actgtaggaattaacagagtcacatcaagtcgaaatcctactccaaagccatggggaaag 480
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 621 actgtaggaattaacagagtcacatcaagtcgaaatcctactccacagccatggggaaag 680

                                                                       
Query: 481 tgttgttggtcctttttgatggctttataaaaaggtaaatatcacccagcaaagacatct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgttgttggtcctttttgatggctttataaaaaggtaaatatcacccagcaaagacatct 740

                           
Query: 541 gatttattggtactat 556
           ||||||||||||||||
Sbjct: 741 gatttattggtactat 756


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space:   554441
Effective search space used:   554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)