ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCAGTTCCAACACCATGTTTGTCTTTGTACAGCCATGCTTCCTGCCA
TGATGATAATGAACTAAACCTTTGAAACTGTAAGCCATTCCCAATTAAAT
GTTTCCTTTATAAGAGTTACCATGGTCATGGTGTCTTTCCATAGCAATAA
AACCCAAAGTAAGACATAGAATATATACAATGATACAAAAGGTCTCTGCC
TTTCTTTCTTTTTAAATTAGGTATTTTCTTCATTTACATTTCAAATGCTA
TCCCAAAAGTCCCCTATACCCCCCCCCCACTCCCCTACCCACTTACTCCC
ATTTCTTGGCCCTGGCGTTCCTCCGTACTGAGGCATATAAAGTTTGCAAG
ACCAAGAGGTCTCTCTTCCCAATGATGGCTGACTAGGCCATCTTCTGCTA
CATGTGCAGCTAGAGACACTAGCGCTGGAGATACTGATTAGTTCATATTG
TTGTTCGACATACAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCT
CTAGCTCCTCCATTGGGGTCCATGTGTTCCATCCAAAGCTGACTGTGATC
ATCCACTTCTGTGTTTGCCAGGCACCAGCATAGCCTCACAAGAGACAGCT
ATATCAGGGTCCTTTCAGCACATGCTTGCTGGTGTATGCAATGGTGTCAG
CGTTTTGGAGGCTGATTATGGCATGTATACCCGGGTATGGCA

TGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTTGAAGTGTTTTCTGAATTTTCAGAAGG
GTTTTTATACAATTTTGATATAGCTTGCAGGTTTTCTAAGGGTCATTTAG
GTTGTAGTGACTGCTCAATAGTTGTAAGTTTTCCAATACACATATAGAGT
ATACTTTTCAGTTTATTTATGTCTTTTTAATCTCAGTAATTTTTGTAGTT
TTTACTGTGGTATTTCCTCAGTATTTAGTAGTTTTTTTATATTCTTGGAA
ATACAAAATTCTTCATAATTTCCCTTTCAAAAATGTTCATGGCTAATAGT
TGGAAATGGCAGCTAATTTGGGTTGTGTTGTTTTGTTTTGTTTTGATTTT
TAAAATCTTTCTACATTATTGATTTCCATTTACCAATTTACCAAATTAAT
AGCATTTTTGCTTGTGTGGATTTTTAATGAATGTATATGTATCATACACA
CAGACACACATACATTTATATATATATATACTGCATCTACTATATTACTA
GATATAATATATATTACATAAATATATATATATTGTATTCCAATGTATAT
GTTTTACATATTTTTCTTTGACTAAGTACTCTGGTGATACTTTTTTAGCT
TATATTAAATAGCAAATGTTAACAAGGGGAATCTTTCCTTGGCTTGGCAT
AAACCAACTTGCCCCCCAAGAAATGGCTTATTTACC

Query= MSMg01no338_j03.g1 MSMg01no338_j03.g1 CHROMAT_FILE:
MSMg01no338_j03.g1 PHD_FILE: MSMg01no338_j03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:14 2005
         (516 letters)



>mm_chr12_43265819_43266734
          Length = 916

 Score =  928 bits (480), Expect = 0.0
 Identities = 502/510 (98%), Gaps = 2/510 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttgaagtgttttctgaattttcagaagggtttttatacaattttgatatagcttgcagg 60
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 609 cttgaagtgttttctgaattttcagaaggttttttatacaattttgatatagcttgcagg 550

                                                                       
Query: 61  ttttctaagggtcatttaggttgtagtgactgctcaatagttgtaagttttccaatacac 120
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ttttctaagggccatttaggttgtagtgactgctcaatagttgtaagttttccaatacac 490

                                                                       
Query: 121 atatagagtatacttttcagtttatttatgtctttttaatctcagtaatttttgtagttt 180
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 atatagactatacttttcagtttatttatgtctttttaatctcagtaatttttgtagttt 430

                                                                       
Query: 181 ttactgtggtatttcctcagtatttagtagtttttttatattcttggaaatacaaaattc 240
           ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 429 ttactgtggtatttcctcagtatttagtagtttttttacgttcttggaaatacaaaattc 370

                                                                       
Query: 241 ttcataatttccctttcaaaaatgttcatggctaatagttggaaatggcagctaatttgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ttcataatttccctttcaaaaatgttcatggctaatagttggaaatggcagctaatttgg 310

                                                                       
Query: 301 gttgtgttgttttgttttgttttgatttttaaaatctttctacattattgatttccattt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gttgtgttgttttgttttgttttgatttttaaaatctttctacattattgatttccattt 250

                                                                       
Query: 361 accaatttaccaaattaatagcatttttgcttgtgtggatttttaatgaatgtatatgta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 accaatttaccaaattaatagcatttttgcttgtgtggatttttaatgaatgtatatgta 190

                                                                       
Query: 421 tcatacacacagacacacatacatttatatatatatatactgcatctactatattactag 480
           ||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||
Sbjct: 189 tcatacacacagacacacacacatttatatatatata--ctgcatctactatattactag 132

                                         
Query: 481 atataatatatattacataaatatatatat 510
           ||||||||||||||||||||||||||||||
Sbjct: 131 atataatatatattacataaatatatatat 102


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space:   458436
Effective search space used:   458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)