XXXXXXXXXXXXXXXXXXXXXXXXTTTCCAGGATCCGCGGAATTCTCTGT
AGATTACCCTAGCTTCAAACTCACAGCGATCCACCTGCCTCTGCCTTCCA
AGTGCTGGCCTTAAAGGTGTGCAGCACCACAGCCAGGCTGACATACTGTT
CTCGTGCAGCTGTTCTTGGGCATGGGTTGTCTATTTACAAAAGGCACCAG
CCCAGAGGTTCTCTCCTCCCTTAATCCTCAGTGAGGATGGTCTTTGTTTC
ATTGGCAGCCTTCTTCAAACACACGTGGCTCACATGGGAAGGACAAAGCT
GGACATTCTGGTCTTATTCTGTACTGTGCCCCATCTTCCTTCAATGTTCT
CCATTCACTTACAATGATTCACTAATTGTATCATTGTAATACTTGATGTT
ATATTTATTAACTTATTCTTTTCTCCATCGTATCTAGTTTACGTCGCCCT
ACTGCTCTTGGAAAGAGGGCCTGCGCTGGAGTGTGGCCAACCTACCAGGC
GCCACATCATTAAAGAAAATCGAGTCTCCCTCTTTCCTCAGCTACCAATA
TCTCCTCTGCCAGAGGTGGGATCCCATGCAGGTATCCTGTCCTCCATACT
GGGATTCCATTTAGACTGAGCTTAGGCAGGTCTCTTGCATGCTGTCACAA
TTGCTGTGAGTTTGAGATGTCTACTGTACCCTGCTGTGTCTGGAANACAC
ATTCTTCGATGTCATCCTCCN

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTATGTATCTTTATTAGTCTGCTTTCATAGTTTT
GGAGAATTAAACCCAGACCCACTCTTATTCATTATGGTGGTTTAAATAAG
TTATGCCTGGAAAACTAATACATTTGAATATTTAGTCCCCAGTTGGTGGC
ACTGTTTGGGGGAGATTTGGGGCCAACAAGGGTGTGGCCTTGTTGGAAGA
AGTGTGTCACTAGGGGCTGGATTTGAGAGGTTAAAGTTTCCCTATGTTTA
GTTTTCTCCCTGGCTTTGTTCTTGCTGTTATGGTTTAACCTGGTGCTATT
TGTATTTTGTTGTTAACTCTGCTTCCTCGAGAGGGATTGTCCCAATGAGG
AGTGGATCAAGTACTCATGTGATTTCATGTGAACATTTTCCTCATTTTAA
CTGATCAAATAAAGGCTAGAGCCTGTGATTGGGCAGTGGGAGGGAAAGGT
GGGGCTGGAGGTTTTAGAGAGGAAGGAGGGGAAGCAGAGGAGGAGATGGA
GGAGAAAGAGAAAGATGGAGGAAGAAGAGGTACAACGAACACCTATCACA
TGTCCCTGTTCCTCGTATAAGCCAATATTATCAATGCACTTCCTTATCTT
GCCATCTCTACTTTCGTTTTTCTCTATCTTTCCCATCCTATTTGTAGTAT
CTTTTTCACTTTATAATCTTTCTTTTATGGTCTTTTGCTCTCTCTTCTTT
GCTCTTCTT

Query= MSMg01no338_k07.b1 MSMg01no338_k07.b1 CHROMAT_FILE:
MSMg01no338_k07.b1 PHD_FILE: MSMg01no338_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:19 2005
         (602 letters)



>mm_chr12_12180996_12181995
          Length = 1000

 Score = 1094 bits (566), Expect = 0.0
 Identities = 593/602 (98%), Gaps = 2/602 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttcaaactcacagcgatccacctgcctctgccttccaagtgctggccttaaaggtgtgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 cttcaaactcacagcgatccacctgcctctgccttccaagtgctggccttaaaggtgtgc 544

                                                                       
Query: 61  agcaccacagccaggctgacatactgttctcgtgcagctgttcttgggcatgggttgtct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 agcaccacagccaggctgacatactgttctcgtgcagctgttcttgggcatgggttgtct 484

                                                                       
Query: 121 atttacaaaaggcaccagcccagaggttctctcctcccttaatcctcagtgaggatggtc 180
           |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 483 atttacaaaaggcaccagaccagaggttct-tcctcccttaatcctcagtgaggatggtc 425

                                                                       
Query: 181 tttgtttcattggcagccttcttcaaacacacgtggctcacatgggaaggacaaagctgg 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 424 tttgtttcattggcagccttcttcaaacacacgtggctcacatgggaaggacgaagctgg 365

                                                                       
Query: 241 acattctggtcttattctgtactgtgccccatcttccttcaatgttctccattcacttac 300
           |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 364 acattctggtctcattctgtact-tgccccatcttccttcaatgttctccattcacttac 306

                                                                       
Query: 301 aatgattcactaattgtatcattgtaatacttgatgttatatttattaacttattctttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aatgattcactaattgtatcattgtaatacttgatgttatatttattaacttattctttt 246

                                                                       
Query: 361 ctccatcgtatctagtttacgtcgccctactgctcttggaaagagggcctgcgctggagt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ctccatcgtatctagtttacgtcgccctactgctcttggaaagagggcctgcgctggagt 186

                                                                       
Query: 421 gtggccaacctaccaggcgccacatcattaaagaaaatcgagtctccctctttcctcagc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gtggccaacctaccaggcgccacatcattaaagaaaatcgagtctccctctttcctcagc 126

                                                                       
Query: 481 taccaatatctcctctgccagaggtgggatcccatgcaggtatcctgtcctccatactgg 540
           ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||| 
Sbjct: 125 taccaatatctcctctgccaggggtgggattccatgcagatatcctgtcctccatactga 66

                                                                       
Query: 541 gattccatttagactgagcttaggcaggtctcttgcatgctgtcacaattgctgtgagtt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  gattccatttagactgagcttaggcaggtctcttgcatgctgtcacaattgctgtgagtt 6

             
Query: 601 tg 602
           ||
Sbjct: 5   tg 4


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1000
Length adjustment: 10
Effective length of query: 592
Effective length of database: 990
Effective search space:   586080
Effective search space used:   586080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)