Query= MSMg01no340_e07.b1 MSMg01no340_e07.b1 CHROMAT_FILE:
MSMg01no340_e07.b1 PHD_FILE: MSMg01no340_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:15 2005
(579 letters)
>mm_chr12_55374965_55375944
Length = 980
Score = 1079 bits (558), Expect = 0.0
Identities = 572/578 (98%), Gaps = 4/578 (0%)
Strand = Plus / Plus
Query: 6 gaattctcttggggtctctttctgtaaatatcatattttttgtttatttttgagacatgg 65
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattctcttgggggctgtttctgtaaatatcatattttttgtttatttttgagacatgg 262
Query: 66 tctctctatgtggccccagttgtcctggaactcattatgtacatcaggctggcctggaaa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tctctctatgtggccccagttgtcctggaactcattatgtacatcaggctggcctggaaa 322
Query: 126 tcacagagatcctcctgcctctgcctcttaagtgctaggattaaaggcatgcaccaccag 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tcacagagatcctcctgcctctgcctcttaagtgctaggattaaaggcatgcaccaccag 382
Query: 186 gccaaggtgttaacatcagttttaaaacaaataatagattactaaaaaaaaaaaaaa--- 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gccaaggtgttaacatcagttttaaaacaaataatagattactaaaaaaaaaaaaaaaaa 442
Query: 243 gtatttctgtaaacatattttatatggaagtagatatttataagatattttgctttcaat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gtatttctgtaaacatattttatatggaagtagatatttataagatattttgctttcaat 502
Query: 303 attttaatcagcatatatccattgtacaaaataatggatttcattatgatattttcatac 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 attttaatcagcatatatccattgtacaaaataatggatttcattatgatattttcatac 562
Query: 363 atacatgtaatatacttgattatattcatactccctcccattactttctcttgtctctct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atacatgtaatatacttgattatattcatactccctcccattactttctcttgtctctct 622
Query: 423 gaattaattatttttaaatattcttagaaagaaaaacagctctgatgatctgaatttcat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gaattaattatttttaaatattcttagaaagaaaaacagctctgatgatctgaatttcat 682
Query: 483 ccctgtccacacaaggggaagagaaaacctgtcctcacaagttatcctgatgtctacttc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ccctgtccacacaaggggaagagaaaacctgtcctcacaagttatcctgatgtctacttc 742
Query: 543 tactcggtggaataataatgtactcagaaataa-taaa 579
||||||||||||||||||||||||||||||||| ||||
Sbjct: 743 tactcggtggaataataatgtactcagaaataaataaa 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 980
Length adjustment: 10
Effective length of query: 569
Effective length of database: 970
Effective search space: 551930
Effective search space used: 551930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_e07.g1 MSMg01no340_e07.g1 CHROMAT_FILE:
MSMg01no340_e07.g1 PHD_FILE: MSMg01no340_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:15 2005
(514 letters)
>mm_chr12_55551471_55552384
Length = 914
Score = 917 bits (474), Expect = 0.0
Identities = 492/498 (98%)
Strand = Plus / Minus
Query: 1 aaaaaagcgtgtgggtcttctagtcacgcaggtctggacgtcacatcccagtgcgttcag 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 698 aaaaaagcgtgtgggtcttctagtcacacaggtctggacgtcacatcccagtgcgtttag 639
Query: 61 cctcaaggacaccagcagtggtttggtacagccccagagtcattactttctcactgcccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 cctcaaggacaccagcagtggtttggtacagccccagagtcattactttctcactgcccc 579
Query: 121 aaactaggttagcaatgaccccagtttcatagagttatatgggaatgaaacaaattgaca 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 578 aaactaggttagcaatgaccccagtttcatagagttatataggaatgaaacaaattgaca 519
Query: 181 tccattaaagcttgtggagtggtgcccgattgacacgtgtttctgattattactatcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tccattaaagcttgtggagtggtgcccgattgacacgtgtttctgattattactatcact 459
Query: 241 cgttctttaataacaactcgtggtagtagcaaaaatttcctgttttaagagcttggagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 cgttctttaataacaactcgtggtagtagcaaaaatttcctgttttaagagcttggagtt 399
Query: 301 actggacataaaacgtctagcccaatttccggcatgtagtagaatctcctcgatatgcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 actggacataaaacgtctagcccaatttccggcatgtagtagaatctcctcgatatgcat 339
Query: 361 ggctagaaaccaccgtgtgatttacctccttacgtttgggactatgcagactcacatgaa 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 338 ggctagaaaccaccgtgtgatttacctccttatgtttgggactatgcagactcacatgaa 279
Query: 421 gagaggtgatcagactgtagcctgacgagagaaacacggcctctgttctgcgtgaccttc 480
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 278 gagaggtgatcagactgtagcctgactcgagaaacacggcctctgttctgcgtgaccttc 219
Query: 481 actaccccgaggtcacta 498
||||||||||||||||||
Sbjct: 218 actaccccgaggtcacta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
