CTCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTAAGTTGATACTTCCCTCCGTAAATGTTTAAAAAATTGCTGTGT
CTGCGCAAGTACACACGTCATGATATGCACATGGAGGTCAGAGGACGACT
GTATGGGGCCGATTCTCCCCGGTACTGGCTCGCATGGCAAGCGCTTTTCC
CAGTGAGTCATCACATCAGCCCATTAATTTCAAAAGCATCACCCCACTTT
TTACTCCATGTTACTTTTGAAGAAGTCAACGTCACTCTGATGTTTGATCC
TCCAAATATGATGTTTGGGGTGTACTGTAAGCTCAGGATGTCTGCTCTAT
ACTTTTCATGCATGAACACCACTCAGGTCTGTCCTTTTATTTAATGTGCC
TCTTTTTCCTCTGGATGAGCTTCTAGAAGATAATCTCAATCTCAAATTTG
TTTTGTGGTTGGAGATGTGGCTCAGTTCGTGGAGTGCTTGCCTAGCAAGC
TCGAGGTCCTAGGTCCAGTCCTCAACACCATATAAGCTAGGCGTGGTGAC
ACACAGCCCTTAGGAGGCAGATGAAGGAAGATTATTAATTCAAAAGGTCA
TTAGCTACAGAGTGAGTTTTAGACCAGCCTGTGTACATGAGACTATATCA
GAAACAAATTAACAACCAACTTGTAAATTCTATTGGTAAATTGTCCTGTG
CTGCTGTAGCCTGTTTCTTCTGAAACCCC

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXATTCTTTTTAAAGTCTGAGTAATGCTC
TCGTGTAACTATGCAGTGTTTTTCTCTATCCATTCTTCTGTTGAGGAACA
TCTAGGTTCCAATTTCTAAGCACTATGTGAACATGGTTGAGCAAGTGTCT
GCTAGGATGAAGCATGTGTTGGGGATCTGCACAAGAATGGTGTAGTTAAA
TCTTGAGGGACATCAGTTTCCATCATCCCGAGGAATTGCTATACCTATCT
TTATAGTGGCTCTACAGGTTTTCACTCCTTCCAGCAATGGATGAGTCTTC
TTTGCTCTGTCTATGGTGGTTGAAGTTTTGTTGCGTGTAGTAGTCTGGGC
TGGCATATGTGGTCCCTTAGAGTTTGTAGAAATTCTTTCCAGTTCCTTCT
GGCTTTTAAAGTCTCCATTGAGAAGTCAGATATTATTCTACTAGGTCTGC
CTTTATATGATACGGGCTCTTTTTCCCTTGCAGCTTTTAATATTCTTTTT
GTTTGGGGGCGTTCTGTACATTTAGTGCTTTGATTATTGTGTGTTAAGAA
AGCAGGCTAACAATAATGTCATCCTCGTTCTGACCTGACTTTATTCTGGG
AGCTCTTTCCTTTCATCTCTATCTATTTCCTCCCATCTAAAGGTATGTGA
TTGAATAGGCAAAAATAAAATGTATGGTATAGGC

Query= MSMg01no340_g04.b1 MSMg01no340_g04.b1 CHROMAT_FILE:
MSMg01no340_g04.b1 PHD_FILE: MSMg01no340_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:23 2005
         (585 letters)



>mm_chr12_76545600_76546584
          Length = 985

 Score =  975 bits (504), Expect = 0.0
 Identities = 564/584 (96%), Gaps = 2/584 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctaagttgatac-ttccctccgtaaatgtttaaaaaattgctgtgtctgcgcaa 62
           ||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattctaagttgaaaaattccctccgtaaatgtttaaaaaattgctgtgtctgcgcaa 262

                                                                       
Query: 63  gtacacacgtcatgatatgcacatggaggtcagaggacgactgtatggggccgattctcc 122
           ||||||||||||||||||||||| |||||||||||||||||||| ||| |||| ||||||
Sbjct: 263 gtacacacgtcatgatatgcacacggaggtcagaggacgactgtgtggagccggttctcc 322

                                                                       
Query: 123 ccggtactggctcgcatggcaagcgcttttcccagtgagtcatcacatcagcccattaat 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 323 ccggtactggctcgcatggcaagcgcttttcccagtgagtcatcacatcagcccattcat 382

                                                                       
Query: 183 ttcaaaagcatcaccccactttttactccatgttacttttgaagaagtcaacgtcactct 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 383 ttcaaaagcatcaccccactttttactccatgttacttttgaagaagtcaatgtcactct 442

                                                                       
Query: 243 gatgtttgatcctccaaatatgatgtttggggtgtactgtaagctcaggatgtctgctct 302
           |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 443 gatgtttgatcctccaaatatgatgtttggagtgtactgtaagctcgggatgtctgctct 502

                                                                       
Query: 303 atacttttcatgcatgaacaccactcaggtctgtccttttatttaatgtgcctctttttc 362
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 503 atacttttcatgcatgaacaccactcaggtctgtccttttatttaatgtgcctccttttc 562

                                                                       
Query: 363 ctctggatgagcttctagaagataatctcaatctcaaatttgttttgtggttggagatgt 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ctctggatgagcttctagaagataatctcaatctcaaatttgttttgtggttggagatgt 622

                                                                       
Query: 423 ggctcagttcgtggagtgcttgcctagcaagctcgaggtcctaggtccagtcctcaacac 482
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| 
Sbjct: 623 ggctcagttcgtggagtgcttgcctagcaaactcgaggtcctaggtccagtcctcaacat 682

                                                                       
Query: 483 catataagctaggcgtggtgacacacagcccttaggaggcagatgaaggaagattattaa 542
           ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||
Sbjct: 683 catataagctaggcgtggtgacacacagcccttaggaggcagacgaaggacgatcattaa 742

                                                       
Query: 543 ttcaaaagg-tcattagctacagagtgagttttagaccagcctg 585
           ||| ||||| |||||||||||||||||||||| |||||||||||
Sbjct: 743 ttctaaaggatcattagctacagagtgagtttcagaccagcctg 786


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space:   560625
Effective search space used:   560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)