Query= MSMg01no341_a18.b1 MSMg01no341_a18.b1 CHROMAT_FILE:
MSMg01no341_a18.b1 PHD_FILE: MSMg01no341_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:11 2005
(376 letters)
>mm_chr12_12522262_12523037
Length = 776
Score = 719 bits (372), Expect = 0.0
Identities = 372/372 (100%)
Strand = Plus / Minus
Query: 5 gaattccatcaaaaaatatataaattccttgttctgggtgaaggcctctgtggtcctttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gaattccatcaaaaaatatataaattccttgttctgggtgaaggcctctgtggtcctttt 517
Query: 65 acagaaaccatcataggaaatgtgtagaagcccttggtattgatgcagctacaacgctaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 acagaaaccatcataggaaatgtgtagaagcccttggtattgatgcagctacaacgctaa 457
Query: 125 ggtgtcttcacagcattggtgtagaatgaaggccatatgaggctatcatcaggactttaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ggtgtcttcacagcattggtgtagaatgaaggccatatgaggctatcatcaggactttaa 397
Query: 185 ctctctgaggtgtaaggtaacttaagcctgataaaatagatttcctacttcacacagttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ctctctgaggtgtaaggtaacttaagcctgataaaatagatttcctacttcacacagttt 337
Query: 245 agatatatcatttccatgtgagccctgaagggcagagaagaggtggttgtgttccagacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 agatatatcatttccatgtgagccctgaagggcagagaagaggtggttgtgttccagacc 277
Query: 305 ctagtttgaagtgtttcaggttgaatggtttgtaatgtcagcttccctttttcttccttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ctagtttgaagtgtttcaggttgaatggtttgtaatgtcagcttccctttttcttccttg 217
Query: 365 cacacttctggg 376
||||||||||||
Sbjct: 216 cacacttctggg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_a18.g1 MSMg01no341_a18.g1 CHROMAT_FILE:
MSMg01no341_a18.g1 PHD_FILE: MSMg01no341_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:11 2005
(352 letters)
>mm_chr12_12319872_12320623
Length = 752
Score = 609 bits (315), Expect = e-179
Identities = 334/345 (96%), Gaps = 8/345 (2%)
Strand = Plus / Plus
Query: 1 tctcctctcaagagaattcaggccaaattttctatcacccacttcttaatggggagtgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcctctcaagagaattcaggccaaattttctatcacccacttcttaatggggagtgag 260
Query: 61 gtcttcccttgactaaaggatttgagaggatgctaggaaggactgacatggagaaaggag 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcttcctttgactaaaggatttgagaggatgctaggaaggactgacatggagaaaggag 320
Query: 121 gggctgggctgacattctcctcagatgtttctatggagacctagcgagacccctccccac 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggctgggctggcattctcctcagatgtttctatggagacctagcgagacccctccccac 380
Query: 181 tcaccatgacctcccccattacttagttaggagccctcataggcatctcctgatcagccc 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 tcaccatgacctcccccattacttagtcaggagccctcataggcatctcctgatcagccc 440
Query: 241 tgctatatgcccctttaatcccccaaatccaccccagatagtgcaccttaagtaaccctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctatatgcccctttaatcccccaaatccaccccagatagtgcaccttaagtaaccctt 500
Query: 301 tctgggtgacccagctacaaagggtttgggtttgtttgtttgttt 345
|||||||||| |||||||||||||||||||||||||||
Sbjct: 501 tctgggtgac--------aaagggtttgggtttgtttgtttgttt 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 752
Length adjustment: 9
Effective length of query: 343
Effective length of database: 743
Effective search space: 254849
Effective search space used: 254849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
