Query= MSMg01no341_f22.b1 MSMg01no341_f22.b1 CHROMAT_FILE:
MSMg01no341_f22.b1 PHD_FILE: MSMg01no341_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:36 2005
(398 letters)
>mm_chr12_90795938_90796735
Length = 798
Score = 658 bits (340), Expect = 0.0
Identities = 367/376 (97%)
Strand = Plus / Minus
Query: 6 aattctccaaacacctatgctcacattagttatacctgtatctcttcttccttgtgccgt 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 544 aattctccaaacacctatgctcacattagttatacctgtatctcttcttccttgtgcagt 485
Query: 66 ctagttgttcttcaagactgtcttagctaccccactctgatttactgccccttcaatgtc 125
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ctagttgttcttctagactgtcttagctaccccactctgatttactgccccttcaatgtc 425
Query: 126 ttcctgactctcactaccttctaccagccgtgcacactgtcttgtacaatgtcatctctt 185
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 424 ttcctgactctcactgccttctaccagccatgcacactgtcttgtacaatgtcatctctt 365
Query: 186 aattgttcccatcaagacagactggggaacccatcacaccctaggcattggacactttta 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aattgttcccatcaagacagactggggaacccatcacaccctaggcattggacactttta 305
Query: 246 aagcagtgtaaagactactggaatttgttaaaagtcacccgtagtggtaatgttaagtta 305
||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 304 aagcagtgttaagactactggaatctgttaaaagtcacctgtagtggtaatgttaagtta 245
Query: 306 tttatattttaagttctctctctgccattttcttgtttcaaaaaacaaaaaacaaacaaa 365
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 244 tttatattttaagttctctctctgccattttcttgtttcaaaaagcaaaaaacaaacaaa 185
Query: 366 caaaaaaaacaaaaca 381
||||||||| ||||||
Sbjct: 184 caaaaaaaaaaaaaca 169
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 798
Length adjustment: 9
Effective length of query: 389
Effective length of database: 789
Effective search space: 306921
Effective search space used: 306921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_f22.g1 MSMg01no341_f22.g1 CHROMAT_FILE:
MSMg01no341_f22.g1 PHD_FILE: MSMg01no341_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:36 2005
(351 letters)
>mm_chr12_90674396_90675148
Length = 753
Score = 644 bits (333), Expect = 0.0
Identities = 348/353 (98%), Gaps = 2/353 (0%)
Strand = Plus / Plus
Query: 1 atagtttgtataagcttttctagatttctgacacctacaaaagttacagtccatttggga 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 atagtttgtataagcttttctagatttctgacacccacaaaagttacagtccatttggga 260
Query: 61 cacacacacacacaaatacctc-cccccccccccacacacacacttctatcatgtgatct 119
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 261 cacacacacacacaaatacctctccccccccccaacacacacacttctatcatgtgatct 320
Query: 120 ctcataaaagtatacaaacacattattctttgattaaatgtagatttcctgaaaccaaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcataaaagtatacaaacacattattctttgattaaatgtagatttcctgaaaccaaag 380
Query: 180 ttttagccatatgttcctgagaaacttttcatagagatggcagactcagactatgagtca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttagccatatgttcctgagaaacttttcatagagatggcagactcagactatgagtca 440
Query: 240 acattttttt-aaggccccctcgatgtccttaaaagaagaaaggggtagcttctaggggg 298
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acattttttttaaggccccctcgatgtccttaaaagaagaaaggggtagcttctaggggg 500
Query: 299 agtggaagatttaatctttctgctagttcaggtcccttggaggcaaaaatggt 351
||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 agtggaagatttaatctttttgctagttcaggtcccttggaggcaaaaatggt 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 753
Length adjustment: 9
Effective length of query: 342
Effective length of database: 744
Effective search space: 254448
Effective search space used: 254448
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
