Query= MSMg01no341_k02.b1 MSMg01no341_k02.b1 CHROMAT_FILE:
MSMg01no341_k02.b1 PHD_FILE: MSMg01no341_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:56 2005
(605 letters)
>mm_chr12_65311232_65312236
Length = 1005
Score = 1087 bits (562), Expect = 0.0
Identities = 595/614 (96%), Gaps = 13/614 (2%)
Strand = Plus / Plus
Query: 5 gaattccaatgaagttaatttctataaatattctaggacagatgtaattaaatatgtaat 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaatgaagctaatttctataaatattctaggacagatgtaattaaatatgtaat 264
Query: 65 atttatttggttgaggccaactacacaataacagaaaagcagtgctttatttcattactc 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 265 atttatttggttgaggccaactacacaataacagaaaagcaatgctttatttcattactc 324
Query: 125 cagaatactcaggacatactcatgagagacagaagagcaaaagattacacacagaaagtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagaatactcaggacatactcatgagagacagaagagcaaaagattacacacagaaagtc 384
Query: 185 ttttgtatgtcaaatctatactcactgacaatagcacattctatagcaaaatttaggctc 244
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 385 ttttgtatgtcaaatctatactcactgataatagcacattctatagcaaagtttaggctc 444
Query: 245 cagaaaagaacttttgctacatatgaattctaataacttttaaggcttggattgaatgat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagaaaagaacttttgctacatatgaattctaataacttttaaggcttggattgaatgat 504
Query: 305 gctgaatgtatttaaaaagttatcaaggtctacagaattaaaataaaaagcaaaataatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gctgaatgtatttaaaaagttatcaaggtctacagaattaaaataaaaagcaaaataatt 564
Query: 365 tgatggaaagttttaaaataaacttttatatataagaatatacacagaaaattttcacaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgatggaaagttttaaaataaacttttatatataagaatatacacagaaaattttcacaa 624
Query: 425 ctctatatgggagcacaagaaaacacagcttgcagaaataaccaatgagacttaagacca 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 625 ctctatatgggagcacaagaaaacacagcttgcagaaataaccaatgagacttaagacaa 684
Query: 485 tgatgaattagcaagagatttgaaggaagctttcacaatgagttcacactat-------- 536
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgatgaattagcaagagatttgaaggaagctttcacaatgagttcacactataatgctgc 744
Query: 537 -----ttgctgtgtgatctggcaatccttctgtacacatctccaacaaaataaaattgta 591
||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaaatttgctgtatgatctggcaatccttctgtacacatctccaacaaaataaaattgta 804
Query: 592 ctttcattgattac 605
||||||||||||||
Sbjct: 805 ctttcattgattac 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_k02.g1 MSMg01no341_k02.g1 CHROMAT_FILE:
MSMg01no341_k02.g1 PHD_FILE: MSMg01no341_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:56 2005
(432 letters)
>mm_chr12_65382373_65383204
Length = 832
Score = 806 bits (417), Expect = 0.0
Identities = 428/432 (99%)
Strand = Plus / Minus
Query: 1 aggttttattctcagataattcttcccttcatcgttgatttcattagattattatcagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aggttttattctcagataattcttcccttcatcgttgatttcattagattattatcagat 477
Query: 61 ttggtcttggaacaatggcagatattataaagaaaatatctttctgtttatgagtcaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ttggtcttggaacaatggcagatattataaagaaaatatctttctgtttatgagtcaggt 417
Query: 121 gtgatgataagatattggactaggcaataacaaataagtgaatggattatgaatatgcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gtgatgataagatattggactaggcaataacaaataagtgaatggattatgaatatgcca 357
Query: 181 acaggaagaaacatgaattaccaagatgtcatgagcatttgtatatgtattttatatctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 acaggaagaaacatgaattaccaagatgtcatgagcatttgtatatgtattttatatctt 297
Query: 241 atgagcaagactgtcagtgattccccaaagagactttcaacaaccaaggcttaagaacta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 atgagcaagactgtcagtgattccccaaagagactttcaacaaccaaggcttaagaacta 237
Query: 301 cagtaactgaagtttttggtatgatttttgagatagaagaatgagaaagggaaggtgaga 360
|||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 236 cagtaactaaagttttcggtatgatttttgagatagaagaatgagaaagggaaggtgata 177
Query: 361 ggagggtgaaaaaaagagaaaggaagacaggaagaaagaanacagaactaagcaacgatg 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 176 ggagggtgaaaaaaagagaaaggaagacaggaagaaagaacacagaactaagcaacgatg 117
Query: 421 gagtaatgagtc 432
||||||||||||
Sbjct: 116 gagtaatgagtc 105
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
