GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCTTTA
TCCATCTTTTATTCTTATACTATAGAATAATGGATTTTGGTTTGACATTT
GTGTATGTGCACATCACGGCCCTTAGCTCATGGTCTTCCCCACTCCTCGT
CTTTCCTCTCTTTCACCCCTTTCTTTACCATAAGTGGTGTCCTTTCTGCT
TCATATATATTTATTTAATTTAGATTCTACATCTGAAAGAAACTATGTGA
CATTTGTCTTCTCTGAGTCTGGATTATTTCACGTAACATATTAATGCCCA
GCTCCATCCATTTTCCTAGAAAGGAAATTTTCTAATATAATAACCATTCA
CATGATACATTTTGAGCATATTTGCTAAAAATATAGAAAAAATAACCACT
TTTCTTTTATTCATTAAAAAAGTTGGGCTGCTGTCTGAGAATATAATACT
AGCTGACTCCCATAAAATCCTTTGATAAGTGAGATTCAATAATGTAAAAA
ATATGTTTTTTTAACAAAAGATCAAATAATGGATACCAGGGTGGACAATA
ATGTATCTTGCAAGTGATCTATGGAAACAAGGCCGACTTTGAAGAAAATA
ATCAAGTTTAAGAAAATACATAATCCGCAGGCTTTATTCTTCCTAACAAA
TATCATAAATGGACAACCGATTTTATTTAAAAAATTTAATATTTCTTCCA
TAGGGGAGAAATTTTCTACAAATGCACTTCCT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTAGAAAATCTTTAATGTCTTTATTTCTTCCTTGACC
CAGTGTCATTGATTAGAGGGTTGTTCAGTTTCCTTGTGTTTGTAGACTTT
CTATTGTTTCTGTTGTTGTTGAAGTTCAGCTTTAATCCATGGTGATTTGA
TAAGATATAGGGAGTTATTTCAATTTTATTGTATCTGTCGAGACTTGCTC
TGTGGCCAAATATGTGGTCAATTTTGGGGAAGGTTCTGTGATGTGCTGAG
GAGAAGGTCTATTCTTTTGTGTTTGGGTGAAATGATCTGTACATATCTAT
TAAGTCCATTTAAGTCATAATGCCTTATTTTCATTATTTCTCTGTTTAGT
TTCTGTTTGGATGACCTGTCTATTGGTGAAAGTGAGGTGTTGAAGTCTCA
GACTATTAGTATGTGGTTCAATATGTGATTTACACTTAATAATGTTATTT
TACACATGTTGGCGCCCTTCTTATGGCGCATAAATATTCACAATTGAAAC
GTCATCCTTGCGAATTTTTCCTTTGAAGAAATTCAAAAATCCTTCCCTAC
CCCTTTTGATTAAATTTTCTTTTAAAACCTATCTTTTTTTCTTTTCCCCT
CCCCTCCCCTTTTTGTTCTTCTCTATTTTTTTTTTTCTTTCCGTTCTCCC
TTGTTTTTTTTCCCTCGTATATTTTTT

Query= MSMg01no342_p17.b1 MSMg01no342_p17.b1 CHROMAT_FILE:
MSMg01no342_p17.b1 PHD_FILE: MSMg01no342_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:39 2005
         (512 letters)



>mm_chr12_78829782_78830693
          Length = 912

 Score =  731 bits (378), Expect = 0.0
 Identities = 411/422 (97%), Gaps = 2/422 (0%)
 Strand = Plus / Minus

                                                                       
Query: 92  gctcatggtcttccccactcctcgtctttcctctctttcacccctttctttaccataagt 151
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 912 gctcatggtcttccccactcctcgtctttcctctctttcacccctttcttcaccataagt 853

                                                                       
Query: 152 ggtgtcctttctgcttcatatatatttatttaatttagattctacatctgaaagaaacta 211
           |||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 ggtgtcctttctactttgtatatatttatttaatttagattctacatctgaaagaaacta 793

                                                                       
Query: 212 tgtgacatttgtcttctctgagtctggattatttcacgtaacatattaatgcccagctcc 271
           |||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 792 tgtgacatttatcttctctgagtctggattacttcacgtaacatattaatgtccagctcc 733

                                                                       
Query: 272 atccattttcctagaaaggaaattttctaatataataaccattcacatgatacattttga 331
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 atccattttcctagagaggaaattttctaatataataaccattcacatgatacattttga 673

                                                                       
Query: 332 gcatatttgctaaaaatatagaaaaaataaccacttttcttttattcatt-aaaaaagtt 390
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 672 gcatatttgctaaaaatatagaaaaaataaccacttttcttttattcattaaaaaaagtt 613

                                                                       
Query: 391 gggctgctgtctgagaatataatactagctgactcccataaaatcctttgataagtgaga 450
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gggctgctgtctgagaatatagtactagctgactcccataaaatcctttgataagtgaga 553

                                                                       
Query: 451 ttcaataatgtaaaaaatatgtttttttaacaaaagatcaaataatggataccagggtgg 510
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ttcaataatgt-aaaaatatgtttttttaacaaaagatcaaataatggataccagggtgg 494

             
Query: 511 ac 512
           ||
Sbjct: 493 ac 492


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space:   452804
Effective search space used:   452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)