Query= MSMg01no343_b09.b1 MSMg01no343_b09.b1 CHROMAT_FILE:
MSMg01no343_b09.b1 PHD_FILE: MSMg01no343_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:47 2005
(447 letters)
>mm_chr12_95123984_95124830
Length = 847
Score = 818 bits (423), Expect = 0.0
Identities = 438/443 (98%), Gaps = 2/443 (0%)
Strand = Plus / Plus
Query: 6 gaattccttgtctttcctctgcctggtctggaagctttcg-ctattgtcctgagctgcct 64
||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||
Sbjct: 206 gaattccttgtctttcctcagcctggtctggaagcttt-gtctattgtcctgagctgcct 264
Query: 65 tgctgtagccagctttaggcccacttactcatcttggacctggatctggctaaatggttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgctgtagccagctttaggcccacttactcatcttggacctggatctggctaaatggttt 324
Query: 125 ttggttcagaaattccaccagctggtcaggttttctggttacctttctaaatgtttctca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttggttcagaaattccaccagctggtcaggttttctggttacctttctaaatgtttctca 384
Query: 185 ttgactttatgtctaatctcttttttattcacgaccttatgcatgttagtatatattttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgactttatgtctaatctcttttttattcacgaccttatgcatgttagtatatattttt 444
Query: 245 aagccaacctcctctaaaccaagtaaactcacatctgcttagactaagcaaaggctagac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagccaacctcctctaaaccaagtaaactcacatctgcttagactaagcaaaggctagac 504
Query: 305 cagatgtgacctgtaatttgctgaataggaaacaaacacaaggcaaactgccttctgcca 364
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 505 cagatgtgacctgtaatttgctgaatgggaaacaaacacaaggcaaactgccttctgcca 564
Query: 365 tctgttgatgcagatagcagcaggccaggactggcatttcaacagactcccccactggga 424
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 565 tctgttgatgcagatagcagcaggccaggcctggcatttcaacagactcccccactggga 624
Query: 425 aaactggtgagaaaaaacatcca 447
|||||||||||||||||||||||
Sbjct: 625 aaactggtgagaaaaaacatcca 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_b09.g1 MSMg01no343_b09.g1 CHROMAT_FILE:
MSMg01no343_b09.g1 PHD_FILE: MSMg01no343_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:47 2005
(361 letters)
>mm_chr12_95323351_95324111
Length = 761
Score = 665 bits (344), Expect = 0.0
Identities = 356/360 (98%)
Strand = Plus / Minus
Query: 1 catttcccagcttatgttttctggtctactttcctgtaaatgtaaatgagaattaggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 catttcccagcttatgttttctggtctactttcctgtaaatgtaaatgagaattaggaag 501
Query: 61 gaggagggacagagctttcaacatttacactaatttgtagaacaagatgcaattttaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaggagggacagagctttcaacatttacactaatttgtagaacaagatgcaattttaaag 441
Query: 121 agaagggaaaaccccaaatgatctgaggtttatattagcccgccaaggcagtggtattaa 180
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||
Sbjct: 440 agaagggaaaaccccaaatgatctgaggtttacattaggccgccaaggcagtggtataaa 381
Query: 181 ttggcatcttctgcagactccaagcctttcagaaacaaaacctttctggaaatctcaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttggcatcttctgcagactccaagcctttcagaaacaaaacctttctggaaatctcaagt 321
Query: 241 gagtaggctttcttgcttcctctctggaagttcctatttctgatcttccttggaaatggt 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gagtaggctttcttgcttcgtctctggaagttcctatttctgatcttccttggaaatggt 261
Query: 301 gcaagaatagattgctttaattccttctgtaggtctgtttctccatttcttcgcagtaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gcaagaatagattgctttaattccttctgtaggtctgtttctccatttcttcgcagtaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
