Query= MSMg01no343_d14.b1 MSMg01no343_d14.b1 CHROMAT_FILE:
MSMg01no343_d14.b1 PHD_FILE: MSMg01no343_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:58 2005
(390 letters)
>mm_chr9_80401434_80402223
Length = 790
Score = 685 bits (354), Expect = 0.0
Identities = 381/390 (97%)
Strand = Plus / Plus
Query: 1 agtagaaagggtagattggccatgaaaggctgaggaaggtatttttgatagctttctttc 60
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 201 agtagaaagggtagattggccacggaaggctgaggaaggtatttttgatagctttctctc 260
Query: 61 tgaaacatctgatgtccccattctgcttctctgtgtgcgtatgtgtaaacacatacatgt 120
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 tggaacatctgatgtccccattctgcttctctgtgtgcttatgtgtaaacacatacatgt 320
Query: 121 aggcatgaaggtgtatatgtacaaaggtatacatatatacattataactgcagggatgta 180
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 321 aggcatgaaggtgtatatgtacaaaggtatacacatatacattataactgcaggtatgta 380
Query: 181 tattcagatctgaaattctcagtgatgccctctttctaggggcagggattaattggcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tattcagatctgaaattctcagtgatgccctctttctaggggcagggattaattggcact 440
Query: 241 acacatttgcttgtcaacatttgaaaggacttaacaagaaatcctgtattttggtgtttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acacatttgcttgtcaacatttgaaaggacttaacaagaaatcctgtattttggtgtttg 500
Query: 301 ctgcctcaaatcagctgtagatagttagaaaatcagcacagtggacaataggactggctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 ctgcctcaaatcagctgtagatagttagaaaatcagcacagtggacaatagcactggctc 560
Query: 361 ttgttggtaaagtgtattatatttaggatg 390
||||| ||||||||||||||||||||||||
Sbjct: 561 ttgttagtaaagtgtattatatttaggatg 590
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_d14.g1 MSMg01no343_d14.g1 CHROMAT_FILE:
MSMg01no343_d14.g1 PHD_FILE: MSMg01no343_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:58 2005
(378 letters)
>mm_chr12_14309254_14310031
Length = 778
Score = 522 bits (270), Expect = e-152
Identities = 285/290 (98%), Gaps = 3/290 (1%)
Strand = Plus / Minus
Query: 90 aaatgtacatgtgcatttcccttggccaaccactggccacaagatgtagtagaaagattt 149
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 448 aaatgtacatgtgcatttcccttggctaaccactggccacaggatgtagtagaaagattt 389
Query: 150 catgtttacagttccc-aagatgtttgctaaaatgcccactaagcaattccattgggctc 208
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 catgtttacag-tccctaagatgtttgctaaaatgcccactaagcaattccattgggctc 330
Query: 209 ataggcactagtatacaggatcctcaagtaaggtgtggtaacatctattgacactaggta 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ataggcactagtatacaggatcctcaagtaaggtgtggtaacatctattgacactaggta 270
Query: 269 aacaactacagtgaattagcttagattcacattagtcatcccacattcattctcagttat 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aacaactacagtgaattagcttagattcacattagtcatcccacattcattctcagttat 210
Query: 329 ctatttgtgcaatagaattttctgacgctgccatgataaaaagcaagatg 378
||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 209 ctatttgtgcaatagaattttctgacgctgccatgat-aaaagcaagatg 161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
