Query= MSMg01no346_n06.b1 MSMg01no346_n06.b1 CHROMAT_FILE:
MSMg01no346_n06.b1 PHD_FILE: MSMg01no346_n06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:37 2005
(513 letters)
>mm_chr12_71608786_71609695
Length = 910
Score = 853 bits (441), Expect = 0.0
Identities = 492/511 (96%), Gaps = 7/511 (1%)
Strand = Plus / Minus
Query: 5 gaattcattgattctgaaaaaaatggagagaataaatcaaagtgatggtgcccgcagaaa 64
||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 710 gaattcattgagcctgaaaaaaatggagagaataaatccaagtgatggtgcccccagaaa 651
Query: 65 tcagaaaggctgctccttctcaggagcctataggctacagaaaggcatgcatttctggct 124
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 650 tcagaaaggctgctccttctcaggagcctacaggctacagaaaggcatgcatttctggct 591
Query: 125 gagtttacaggagaccctggacaggacatctggagaccagtaacagggtgcatattccag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gagtttacaggagaccctggacaggacatctggagaccagtaacagggtgcatattccag 531
Query: 185 tttccattagcacagaaggctttctgagtggctgagggtatcccaagtgggaacccacca 244
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 530 cttccattagcacagaaggctttctgagtggctgagggtatcccaagtggga----acca 475
Query: 245 aaaccatctgacaattttcagaagagg-aataatagtttccagacattgcagcccatgat 303
||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct: 474 aaaccatctgacaattttcaggagaggaaataagagtttccagacattgcagcccatgat 415
Query: 304 aatttgcttctataaagctacactttacaaagacagttcttcatacctgctacaaccttg 363
||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 414 aatttgcttctataaagttacattttac-aagacagttcttcatacctgctacaaccttg 356
Query: 364 ttgggttgagtcctttgtagatgagaacatgtctcaagatcacgtacaataagcagaaag 423
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tcgggttgagtcctttgtagatgagaacatgtctcaagatcacgtacaataagcagaaag 296
Query: 424 aaaacctacacagggcttatctgtttctttctaaccttgctggaccacattcccaggctt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aaaacctacacagggcttatctgtttctttctaaccttgctggaccacattcccaggctt 236
Query: 484 ca-ttttcctggcaaggtcccatcccagtgc 513
|| | ||||||||||||||||||||||||||
Sbjct: 235 cagtcttcctggcaaggtcccatcccagtgc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 910
Length adjustment: 10
Effective length of query: 503
Effective length of database: 900
Effective search space: 452700
Effective search space used: 452700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_n06.g1 MSMg01no346_n06.g1 CHROMAT_FILE:
MSMg01no346_n06.g1 PHD_FILE: MSMg01no346_n06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:37 2005
(338 letters)
>mm_chr12_71439519_71440256
Length = 738
Score = 476 bits (246), Expect = e-138
Identities = 303/338 (89%), Gaps = 26/338 (7%)
Strand = Plus / Plus
Query: 1 tctgcctatatgtttctttctgtttgtttttagagttcagcagctaaagccatcgtagtt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 tctgcctatatgtttctttctgtttgtttttagagttcagcagctaaagccatcatagtt 260
Query: 61 gtagagactgaaggtgcagaggcacctttgcaggggtggtgaagcgtgcagttctgagtg 120
||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 261 gtagagactgaaggtgcagagaaacctttgcaggggtggtgaagtgtgcagttctgagtg 320
Query: 121 agagcatggacctggggcagggatgcagagccagttcattcaagctgcatttagttggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagcatggacctggggcagggatgcagagccagttcattcaagctgcatttagttggga 380
Query: 181 tgttgaaatctggcctaagaatgtgggggaggtaaacccaatgggtaggagatagccata 240
||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 381 tgttgaagtctggcctaagaaggtgggggaggtaaacccaatgggtagga------cata 434
Query: 241 aacccaatgggtaggagatagccggaaggtcagaagttcagatggggtggggaggaggaa 300
|||||||||||||||| |||||||| ||||||||||||||
Sbjct: 435 --------------------gccggaaggtcagaaggtcagatggagtggggaggaggaa 474
Query: 301 gctaagaggcagataggactgtgactagtcctagccta 338
||||||||||||||||||||||||||||| ||||||||
Sbjct: 475 gctaagaggcagataggactgtgactagttctagccta 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
