Query= MSMg01no347_c16.b1 MSMg01no347_c16.b1 CHROMAT_FILE:
MSMg01no347_c16.b1 PHD_FILE: MSMg01no347_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:03 2005
(509 letters)
>mm_chr12_80340791_80341699
Length = 909
Score = 953 bits (493), Expect = 0.0
Identities = 505/509 (99%)
Strand = Plus / Minus
Query: 1 gggctggacagatggatcagcagtaaagagaactgcctgctcttccagagtatccaggtt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 883 gggctggacagatggatcagcagtaaagagaactgcctgctcttccacagtatccaggtt 824
Query: 61 caattctcagcacccacatggtggctcataaccatctgacctccgtgggcaccaggcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 caattctcagcacccacatggtggctcataaccatctgacctccgtgggcaccaggcaca 764
Query: 121 catgtggtacacagacatacgtgcaggcagaatacacacataaaataaaataaaactcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 catgtggtacacagacatacgtgcaggcagaatacacacataaaataaaataaaactcat 704
Query: 181 ttaaaaataaaattcaaggactataaaggtcaaaaaaaaaaaaaagatataaaatccata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ttaaaaataaaattcaaggactataaaggtcaaaaaaaaaaaaaagatataaaatccata 644
Query: 241 aggaatgatgttccagaaagctgggatctttaaaagaaaacatatacaagtagaaaggcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 aggaatgatgttccagaaagctgggatctttaaaagaaaacatatacaagtagaaaggcc 584
Query: 301 aagtttcccctaactgtctgaggtttctcagtactgtaatgtctcagaaattatatcatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 aagtttcccctaactgtctgaggtttctcagtactgtaatgtctcagaaattatatcatc 524
Query: 361 tcttgccaaattaagacccaatcccttctcagtggagaattggaaggatcttctttagat 420
| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tgttgccaaattaagaccgaatcccttctcagtggagaattggaaggatcttctttagat 464
Query: 421 ctctccaggataaaataacatccaacccaagggtctctgggaccacgtaattaccaatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ctctccaggataaaataacatccaacccaagggtctctgggaccacgtaattaccaatgt 404
Query: 481 atactgccaactcagctggtgacagggaa 509
| |||||||||||||||||||||||||||
Sbjct: 403 aaactgccaactcagctggtgacagggaa 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_c16.g1 MSMg01no347_c16.g1 CHROMAT_FILE:
MSMg01no347_c16.g1 PHD_FILE: MSMg01no347_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:03 2005
(480 letters)
>mm_chr12_80144849_80145728
Length = 880
Score = 847 bits (438), Expect = 0.0
Identities = 476/500 (95%), Gaps = 21/500 (4%)
Strand = Plus / Plus
Query: 1 tctcctgatttccttgcagaaggatcatagcaaggtcaggt-gggactacatgagatttt 59
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 182 tctcctgatttccttgcagaaggatcatagcaaggtcaggtaggg-ctacatgagatttt 240
Query: 60 ggctcaaaaaaa------------------aaaa-aaaacccaaaccaaacaaacaaaag 100
|||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 241 ggctcaaaaaaaaacaaaacaaaacaaaacaaaacaaaacccaaaccaaacaaacaaaag 300
Query: 101 gagtagaggacctacaggagggacaaaaatgcattggtagaaaataaatctaaatctatc 160
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 301 gagtagaggacctacaggagggacaaaaatgcattggtaggaaataaatctaaatctatc 360
Query: 161 agtcataggtgacatataagaaatatatatatagtggtgctgatgtatgaaaagtaggaa 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agtcataggtgacatataagaaatatatatatagtggtgctgatgtatgaaaagtaggaa 420
Query: 221 cgtgtctagtcagagctaaacctgcctgtgagcacagcactcaggagactggtgtagtct 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgtgtctagtcagagctaaacctgcctgtgagcacagcactcaggagactggtgtagtct 480
Query: 281 tctgaagccacacggaggacgtcaagtaggcccccaaacctttgctttatctgtactgtt 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tctgaagccacacggaggacgtcaagtaggcccccaaacctttgctttatctgtactgtt 540
Query: 341 ttgtccagtgtgtaaaaggtaggtgtaagaatgttgggcacaaactttggggtgttggga 400
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttgtccagtgtgtaaaaggtaggcgtaagaatgttgggcacaaactttggggtgttggga 600
Query: 401 atcaggctcagggctttgtacatggtaagcaatgttttatttttctgagttgtaccccca 460
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 601 atcaggctcagggctttgtacatggtaagcaatgttttatttttctgagttgcaccccca 660
Query: 461 gctttgggggggattctgtt 480
||||||||||||||||||||
Sbjct: 661 gctttgggggggattctgtt 680
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
